Benincasa hispida (wax gourd): 120088048
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Entry
120088048 CDS
T07258
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120088048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120088048
03036 Chromosome and associated proteins [BR:
bhj03036
]
120088048
Messenger RNA biogenesis [BR:
bhj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120088048
Chromosome and associated proteins [BR:
bhj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120088048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
120088048
NCBI-ProteinID:
XP_038901001
LinkDB
All DBs
Position
10:4734168..4743082
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AA seq
1068 aa
AA seq
DB search
MASPFCLPLVSENFSEVHDARSYLSPFASSRSDLDATTSEDQAASQHKRRRIASNADLSS
HDHLKEQKNSFPTLQSPDYYMSPSLEEMSNHVLKDPDYTSQVLDFTVGRCGYGSVKFFGT
TDVRWLDLDQIVKFHRNEVIVYEDETTKPIIGQGLNKPAEVTLVLRSITASFLERQFDNV
VKKLKYFTEKQGAHFISFDPENCEWKFSVNHFSRFGLTEDEEEDIVMDDANAVQDPAEIN
CNEISDNNENNSMDFTESVLCHSLPAHLGLDPLKMKEMRMVIFPEDEQEFEDYNESPKFQ
KSFTGREYMRSPFKDSSQRTSQKLNSPVVRKTPLALLEYNQGSLDSYSPGSILMSQPKKV
TPVKRLKAEGFKLDLMHETPITINHSCNIVDAGLFMGRSFRVGWGPNGILVHTGNLVGST
NSQRVLSSVINVEKVAIDNVVRDENGKMRKELVEFAFDLPLSLHKEMNHEFEEGSFNLKL
QKVVFNRLTLPDICRGYIDIVERKLEVPGLSSSTRLVLTHQIMVWELIRVLFSERENVGN
SLADDNEEDMMQDIKEASLKFDLEALPLIRRAEFSCWLQESVFPQVQYEISSLNDSSYLE
HIFFLMTGRQLDAAVQLASSRGDVRLACLLSQAGGFTVGSTVSRNDVALQLDIWRRNGLD
FSFIEKERTRLYELLAGNIFDALHDIDLDWKRFLGLLMWYRLPPDTTLPVIFHSYQHLLK
SGRAPLPVPVYADGSQELALKSNTNEYLDLSYFLMLLHANEDPEFGFLKTMFSAFSSTDD
PLDYHMIWHQRAVLEAIGAISSKDLHILDMGFVSQLLCLGQCHWAIYVVLQMPFHDDFPH
LQAKVIREILFQYCEIWSSQESQFEFIENLGVPRIWLHEAMAVFFSYHGNLPEALEHFIE
CRNWHKAHTIFTTSVAHRLFLSAEHSDIWKLATSMEIHKSEIENWEFGAGIYISFYSLRS
SLQENNEGSELDSLESRNVACEEFLGRLNESLAVWGDRLPVEARVVYSKMAEEISRLLLS
DIGEGSTRDAQLSCFNTIFTAPMREDLRSSHLQDAVSLFTCYLSEITS
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcccttttgtcttcctttggtttccgagaatttcagtgaagttcatgatgca
agaagctacctatcaccctttgcgagttccaggtcggatcttgatgctacgacctctgaa
gatcaagctgcttcacaacacaagagaagaagaattgcctctaatgctgatctttcatct
catgatcatttgaaggagcagaaaaactcctttccgacattgcagtctcctgattattat
atgtctccaagcttagaggagatgtctaaccacgttctgaaagatcccgattacactagt
caagtgttagattttactgtaggacgttgtggttatgggtctgttaagttttttggtacg
actgatgtcagatggttagatttagaccaaattgtgaagtttcataggaacgaagttatt
gtgtacgaagatgaaaccaccaagcctataattggtcaaggtcttaacaagcctgctgaa
gttactttggttctgcggtcaataacagccagctttttggaaaggcaatttgataatgtt
gtgaagaaattgaaatactttaccgagaaacagggagctcacttcatttcatttgatcca
gaaaattgcgaatggaagttctcagttaaccatttcagccggtttggcttgacggaagat
gaagaagaagatattgtaatggatgatgctaatgcggtacaagatcctgcagaaatcaac
tgcaacgagatttctgataataatgaaaacaactcaatggacttcactgaatctgtgctt
tgccattcccttcccgctcatcttgggcttgatccattaaagatgaaagaaatgagaatg
gttatatttcctgaagacgagcaggagtttgaggattataatgaatctcctaagtttcaa
aaatcattcacaggtagagaatatatgagatctccttttaaggattcttctcagaggacg
agccaaaaattaaattctccagttgtcagaaagactccactagcattgcttgaatataat
caaggtagccttgactcatattctcctggttccattttgatgtcccaaccaaaaaaggtt
actcctgttaagcgcttgaaagcagaaggtttcaagctagaccttatgcatgaaactcca
attactataaatcattcttgcaacatagttgatgcaggtttgtttatgggtaggtcattt
cgtgttgggtggggccctaatggcatcctagttcatactggaaatttggtggggagtacg
aattcacagagggtcctatcatctgtaataaatgtagagaaagttgccattgacaatgtg
gtgagagatgaaaatggtaaaatgcgtaaagaattagttgaatttgcttttgatcttcct
ttaagtttacataaggaaatgaatcatgaatttgaagaaggatccttcaatttgaaactt
caaaaggttgtcttcaatcgtctaacgcttccagatatttgtaggggctatatagatatc
gttgaaaggaagcttgaagttcctggattatcttcttctactcgtttagttttgacacac
cagataatggtttgggagttgataagagttcttttttctgaaagggaaaatgttggcaat
agtttggctgacgataatgaggaagacatgatgcaggatataaaagaagcttcattgaaa
tttgacttggaagcactccctcttattcggagggctgaattcagctgttggctgcaagaa
agtgttttcccccaggtgcaatatgaaataagttcattaaatgattccagttatcttgaa
catatattttttcttatgactgggcggcagctggatgcagcagtgcaacttgcttcttct
agaggtgatgtgagacttgcttgtttgctgagtcaggctggtggattcactgttggatcc
actgtgagtcgcaatgatgttgctctacaacttgatatttggagaaggaatggattggat
ttcagctttattgagaaggaacggacacggttatatgagttgctggcagggaatatattt
gatgctttgcatgacattgaccttgactggaagagattccttgggctgttgatgtggtat
cgtctaccaccagataccactctgcctgtaatatttcactcttatcagcatcttcttaag
agtggaagggctccactccctgttccagtttatgctgatgggtctcaagaactggctttg
aagtctaatacaaatgaatatcttgacctctcatattttctcatgctgcttcatgctaat
gaagatcctgaatttggctttcttaagactatgtttagtgccttctcatcaacagatgac
ccacttgattatcacatgatctggcatcaacgtgcagtgttggaagctattggtgcaatc
agttctaaagatctgcatattcttgatatgggatttgtttctcaattgctgtgtttgggg
caatgccattgggccatctatgtggtccttcagatgcccttccatgatgattttccacac
ctccaggctaaagttatcagggaaatcctattccaatactgtgaaatatggagttcacag
gaatcacaatttgaatttattgagaacttgggtgttccaagaatatggctacacgaggcg
atggcagtttttttcagttaccatgggaatcttccagaggccctcgaacatttcattgaa
tgtagaaattggcataaagctcatactatttttacaacttcagttgctcatagattattc
ctttcagctgagcactcagatatatggaagcttgctacttcaatggagatccacaagtct
gaaatagaaaattgggaatttggagctgggatttatatatcattttattctctgaggagt
tctttgcaggaaaataatgaagggagtgaactggactcacttgagagcagaaatgttgct
tgtgaggaatttcttggtcgactaaatgaatcattggcggtttggggtgacagattacca
gttgaggcaagagttgtttactcaaagatggccgaggagataagtagattacttctgtca
gatattggggagggttctactcgtgatgctcagttgagttgctttaacactatttttacc
gccccaatgcgagaggatcttcgctcaagtcacttgcaggatgctgtttcccttttcact
tgttacctgtcagaaatcacatcatag
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