Benincasa hispida (wax gourd): 120088098
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Entry
120088098 CDS
T07258
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120088098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bhj04131
]
120088098
Membrane trafficking [BR:
bhj04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
120088098
Hops complex
120088098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_C
Clathrin
zf-C3H2C3
TPR_Vps41
zf-C3HC4_2
zf_RING_Vps8_fungal
zf-RING_5
zf-RING_6
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
120088098
NCBI-ProteinID:
XP_038901085
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All DBs
Position
10:31432118..31437018
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AA seq
958 aa
AA seq
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MYQWRKFEFFEEKLAGRCTIPEEVREKKIECCSSGRGKVVIGCDDGSVNLLDRGLKFSYG
FQAHSSTVSFLQQLKQRNFLVTVGEDVQVAPQHTAMCLKVFDLDKIEPEGSSATSPECIG
ILRIFTNQFPEAKITSFLVLEEAPPILLIAVGLDNGCIYCIKGDIARERINRFKLQVDIS
DKNQSSITGLGFRVDGQALQLFAVTPDSVSLFSLQSQPPKGQTLDHIGCGVNGVTMSDRS
ELIIGRPEAVYFYEVDGRGPCWAFEGEKKLVGWFRGYLLCVIADQRNGKNTFNIYDLKNR
LIAHSLVVKDVSHMLCEWGSIILIMDDQSALCIGEKDMESKLDMLFKKNLYTIAINLVQS
QQADAAATAEVLRKYGDHLYSKQDYDEAMAQYIHTIGHLEPSYVIQKFLDAQRIYNLTNY
LENLHEKGLASKDHTTLLLNCYTKLKDVEKLNVFIKNEDGAGEHKFDVETAIRVCRAANY
HEHAMYVARRERKHEWYLKILLEDLGRYDEALQYIASLEPSQAGVTIKEYGKILIAHKPR
ETIDILMNLCTEDGESLKERASNGTYLSMLPSPVDFLNIFIHHPQSLMEFLEKYTNKVKD
SPAQVEINNTLLELYLSNDLNFPSMSQISNGRNISLVERSGATMMSAESNTKVSSESTDH
MKDKDRLERQEKGLRLLKSAWPSELENPLYDVDLVIILCEMNAFREGLMYLYEKMKLYKE
VIACYMQTHDHEGLIACCKRLGDSGKGGDPSLWADLLKYFGELGEDCSKEVKEVLTYIER
DDILPPIIVIQTLSRNPCLTLSVIKDYIARKLEQESKMIEEDRRAIEKYQEDTLAMRKEI
EDLRTNARIFQLSKCTACTFTLDLPAVHFMCMHSFHQRCLGDNEKECPECAPEYRKVIEM
KRSLEQNKDQDQFFQQVKSSKDGFSVIAQYFGKGIISKTSNGTMNVTNPENPSSTNGF
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaatggaggaaattcgagttcttcgaagagaaactcgccggaagatgcacaatt
ccggaagaggtaagggaaaagaagatcgagtgttgctccagcggcagagggaaggtggtg
atcggttgcgatgacggtagcgttaatctacttgatcgtgggcttaagttcagctatgga
tttcaagctcattcctcgaccgtatcctttctgcaacagctcaagcaacggaactttcta
gtcactgttggagaagatgtgcaagtagctccgcaacacactgctatgtgcctaaaggtt
tttgaccttgataaaattgagccggagggctcaagtgcaactagtcccgagtgcattgga
attttgaggatatttactaatcaatttcctgaggcgaagattacgtcatttctagtccta
gaggaggcacccccaatactacttattgctgttggcctagataatggttgcatatactgc
atcaaaggagacattgcacgtgaacgtatcaatcgtttcaagcttcaggtagatatctca
gacaagaaccaatcatctatcacgggactagggttcagagttgatggtcaagcgcttcag
ttatttgcagtaactcctgattcagtgagtttattcagcctgcagagtcaaccaccaaag
gggcaaaccctggatcatattggatgtggtgtgaacggtgttacaatgagtgatcgatcg
gagttgataattggtcgtcctgaggcagtttatttttatgaagttgatgggcgtggtccc
tgctgggcttttgaaggagaaaaaaaacttgtaggatggtttcgtggataccttctctgt
gtgattgcagatcagagaaatggcaagaacactttcaacatttatgacctgaagaatcga
ttgattgcccatagtctagttgttaaagatgtttctcacatgctttgtgaatggggtagt
attatacttataatggacgaccaatcggctctatgtattggggaaaaggacatggaaagc
aaattagatatgctatttaaaaagaatttgtacaccattgctataaatcttgttcaaagt
caacaagctgatgctgctgcaactgcagaagtgcttagaaagtatggggaccatctatat
agcaagcaagattatgatgaggctatggcccagtatatccatactattggacatcttgag
ccttcttatgttatacagaaatttcttgatgctcagcgaatctataacctcactaattac
ttggaaaatttgcatgagaaggggcttgcttctaaagatcataccacacttctactaaac
tgctataccaaattgaaagatgttgaaaagctgaatgtatttattaagaatgaggatggt
gctggagagcataaatttgacgttgagactgcaataagggtttgtcgtgctgccaattac
cacgaacatgccatgtatgttgctagaagggaacgaaagcacgaatggtaccttaagatc
ttacttgaagaccttggaagatatgatgaagccttgcaatatattgcaagccttgagcct
agtcaagctggggtgacaattaaggagtatgggaagattctgatagcacacaagccacgt
gagacaattgatattcttatgaacctatgcaccgaggatggtgagtcattgaaggaaagg
gcttcaaatggcacatatttatctatgttaccatctcctgttgactttcttaatattttc
attcatcacccacagtcacttatggaattccttgaaaagtatactaacaaggttaaggac
tcgcctgctcaagttgaaattaacaatacactgttggaattatacctgtcaaatgatttg
aactttccgtcaatgtcccaaattagcaatggacgaaatattagtcttgtagaaagatca
ggagcaacaatgatgtcagctgagtccaatactaaagtgagctctgagagtacagaccat
atgaaggataaagaccggcttgaaaggcaagagaagggattacgtctgctaaagagtgca
tggccatcagaactggaaaatcccctctatgatgttgatcttgttattattttgtgtgaa
atgaatgcatttagggaaggacttatgtatttatatgaaaagatgaaactttataaagag
gttatagcttgctatatgcaaactcatgaccatgagggtttgattgcttgctgtaaaaga
ttgggcgattcaggaaagggaggtgacccttccctatgggcagatcttttgaagtatttt
ggcgaacttggagaagattgttccaaagaagtgaaggaagttttgacctatattgaaagg
gatgatatcttgcctcccattatagttattcagacgctgtcaagaaatccatgcctcaca
ctttctgtcatcaaggactatattgcaagaaagctcgaacaggaatccaagatgattgaa
gaggatagacgggcaattgaaaagtatcaggaagacacattggcaatgagaaaagaaatt
gaagatctcaggacaaatgcaagaatttttcagctcagcaagtgcactgcgtgcacgttc
actcttgatctcccagctgtacacttcatgtgtatgcattcattccatcagcggtgtttg
ggggataatgaaaaagaatgcccagagtgtgctccagaatacagaaaagttatagagatg
aagagaagcttggagcagaataaggatcaggaccagttcttccagcaagtgaagagttca
aaagacggtttttctgtgattgcccagtacttcggtaagggaatcattagcaaaactagt
aatggaactatgaatgttacaaacccagagaatccttcttcgacaaatggtttttaa
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