Benincasa hispida (wax gourd): 120088145
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Entry
120088145 CDS
T07258
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II isoform X1
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bhj03041
]
120088145
Spliceosome [BR:
bhj03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
120088145
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GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
120088145
NCBI-ProteinID:
XP_038901162
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Position
10:39933753..39994733
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AA seq
678 aa
AA seq
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MAIDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYVDHHQYPDFSRIPASCDYNTAL
SCIIITHFHLDHIGALPYFTEVCGYNGPIYMTYPTMALAPLMLEDYRKVLVDRRGEAEQF
TNDHIMECMKKVVPVDLKQTIQVDEDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNM
TPDRHLGAAQIDRMQLDLLITESTYATTIRDSKYGREREFLKAVHNCVASGGKVLIPTFA
LGRAQELCVLLDDYWERMNLKVPIYVSAGLTVQANMYYKMLISWTSQKVKETYSTRNAFD
FKNVQKFDRSMIDAPGPCILFATPGMISGGFSLEVFKRWAPSKSNLITLPGYCVAGTVGH
KLMSGKPTKIDLDKDTQIDVQCQIHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKM
ATLKQRIHSELGIPCYDPANNETVSISSTLSVKAEASRMFIQSCSTPNFKFLKRNLNNKV
DPNLKDLSCKAGGTSRVFIRKCSNHHFKYLNRNLDTKFDSSFSCGPELQVSDDRVNEGIL
VMEKGKKTKVLHQDEVLLLLGEQEHEVRFANCRPIYFGNLEETHVMDCLSRKSLWLSQLF
SKLSSELSDKNVQNLGEYLQVESFTLSICSKEDCPYRTTNRIENESTIVFCCCSWLIADE
ILAWKIISILEKHNLGST
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggccatcgattgcctcgttcttggtgctgggcaagaagttgggaagagttgtgtggtc
gtcacaatcaatggaaagcgaattatgtttgattgtggaatgcatttgggctatgttgat
catcatcaatatcctgatttctctcgcatacctgcttcttgtgactataatactgctctc
tcttgtatcatcatcacacattttcacttggaccatataggtgctcttccatacttcact
gaagtttgtggctataatggacccatttacatgacgtatccaacaatggcattggctcct
ttaatgttggaagactatcgaaaagtgctggttgatcgaaggggtgaagcagagcaattt
actaatgatcatattatggagtgcatgaaaaaagttgtacctgtggatttgaagcagact
atacaggttgatgaagatcttcaaattcgtgcttactatgctggacatgttttaggagct
gccatgttttatgctaaagttggagatgctgctatggtatacacaggagactataatatg
acgcctgatagacatctgggagcagctcaaattgatcgaatgcaattagaccttcttata
acagagtctacatatgcaacaaccatacgtgattctaaatatggtcgtgagagagaattt
cttaaagctgttcataattgtgtggctagtggagggaaggtccttattcctacttttgca
cttggacgggctcaggaactctgtgtcttgttggatgactattgggagcgcatgaatctg
aaggttccgatatatgtttcagcaggtttgactgttcaagctaatatgtactataaaatg
ctcatcagttggacaagccagaaggtcaaagagacgtactctacaaggaatgcatttgac
tttaagaatgttcaaaagttcgaccgttctatgattgatgctcctggaccttgtattctc
tttgctacaccagggatgatcagtggtgggttttctcttgaagtttttaagcgctgggca
ccttctaaatcgaatctgatcacattacctgggtattgtgtggctggaactgttggacac
aagttaatgtcaggcaagcccaccaaaattgatctggacaaggacactcaaattgatgtg
caatgccagattcaccaactggcattcagcccacatactgattccaaaggaattatggat
cttgtgaagttccttagtccgaagcacgtgatacttgtacatggagagaagcctaagatg
gctactttaaagcagaggattcattctgaactcggaatcccatgttatgatcctgcaaat
aatgaaaccgtatccatttcttcaactctttctgtcaaagcagaagcctcaaggatgttt
attcagagttgttcaactcctaatttcaagtttttgaaaagaaacctgaacaataaagtt
gatcctaatttaaaagatttaagttgcaaagcaggaggaacttcacgcgtgtttatacgc
aaatgctcgaatcaccatttcaagtatttgaatagaaatttggacaccaagtttgattct
agttttagttgtggtccagagctacaggtaagtgatgatagagtgaacgaagggatcttg
gtgatggaaaagggtaagaaaacaaaggtgttacaccaggatgaagtactgctactcttg
ggagaacaagagcatgaggttaggtttgctaattgtagacccatatattttggaaactta
gaggagacccatgttatggattgcttatctagaaaatctttatggctttcccagctattt
tcaaagctttcaagtgaactttcagacaagaatgttcaaaatcttggtgagtatcttcaa
gttgaatcatttacactgtccatttgttcaaaggaagattgcccttacagaactacaaat
agaattgaaaatgaatctactatagtattttgttgctgtagttggctaattgcagatgaa
atccttgcatggaaaatcatttctatcttggagaagcataatctcggttcaacatga
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