Benincasa hispida (wax gourd): 120088472
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Entry
120088472 CDS
T07258
Name
(RefSeq) protein CHROMATIN REMODELING 35 isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120088472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhj03400
]
120088472
DNA repair and recombination proteins [BR:
bhj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
120088472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_16
Motif
Other DBs
NCBI-GeneID:
120088472
NCBI-ProteinID:
XP_038901734
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Position
10:complement(48981958..48989976)
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AA seq
903 aa
AA seq
DB search
MDATIDFSPNSYATPNGLYYGRRKRLKLSTNGKDFPSPATFSAQKCDTPRQNKMKNSEKI
IDYSDPFAINNLIEGLDCGQFGSVTKEIESLVSHKMQVLSPYIAKYPTLSSMLFDLGRNK
ESTEAMNNQASQLVHDLIDLEDDSVTDVCSNNVEKSRLPIVIIDSDEEDSKDQRVIHPFQ
EVLLPRPLGQSLFKDIAVVDHRAPWDHRAYGEEATPISERETISKKDKGVYVGVEEDGDE
VSEQANIEDDGLGDIWNDMQMALECAKDLDATVDSSPNQQTADAVDCDHSFLLKDDLGYV
CRICGVIDRGIETIFEFQYNKGKRSTRTYVSESRNKDSGNIVGVQISEDDLTVTEISAHP
RHMKQMKPHQIEGFNFLISNLVSDNPGGCILAHAPGSGKTFMIISFMQSFLAKYPQARPL
VVLPKGILATWKKEFQIWQVEDIPLYDFYSVKADNRAQQLTVLNQWVEHKSILFLGYKQF
STIVCDVETSAASTACQNILLQVPTILILDEGHTPRNENTDTLQTLAKVRTPRKVVLSGT
LYQNHVKEVFNIVNLVRPKFMRSETSRPIIKRIMSRVDIPGVRKQFKAGVDAAFYDLVEH
TLQKDTDFRRKVSVIHDLREMTSKILHYYKGDFLDELPGLVDFTVVLNLTSKQKHEGEKV
KKFNRKFKISSAGSAVYLHPKLNVFSVNAAVTDDKIDEVIDKMDVRDGVKTKFFLNMLNL
CATTGEKLLVFSQYLLPLKFMERLVVQKKGWSPGRETFMISGETTPEQREWSMERFNTSP
DARVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFRPGQTKKVFAYRLVAA
DSPEEGDHSTCFKKELIAKMWFEWNEYCGYHDFEVETVDVKQCGDNFLETPLLGQDVKVL
YRR
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgaccattgatttctctcccaatagctacgctactcccaatggactgtattat
gggagacgtaagagactaaaattatctaccaatggaaaagattttcctagccctgccacc
ttctctgcccaaaaatgtgacacaccgagacaaaacaaaatgaagaactcggaaaaaata
attgattactcagatccatttgccattaataatttgatcgagggtctggattgtggtcag
tttggaagtgtcactaaagagatagaatcccttgtttcccataagatgcaagttttaagt
ccttacattgccaagtatcctacgctgtcaagtatgttatttgatctggggagaaataaa
gagagtacagaagcaatgaacaatcaagcttcccagttggttcatgatctcattgatttg
gaggatgattctgtcactgatgtttgttccaacaatgttgagaaatcacgattgcctatc
gtaataattgattctgatgaggaagacagcaaagatcagagagttatacatccttttcaa
gaggttctgctgcctagaccactgggacaaagtttgttcaaggacatagcggtagtggat
caccgagctccctgggatcaccgagcttatggggaggaagcaactcctattagtgaacgt
gaaactataagtaagaaagacaaaggtgtttatgttggtgtagaagaggatggggatgag
gtcagcgaacaggctaacattgaagacgatggccttggagatatttggaacgatatgcaa
atggcattagaatgtgccaaggacttggatgccactgtagattcatcacctaaccagcaa
actgcagatgctgtggactgtgatcattcttttctcttgaaggatgatcttggttatgtc
tgtcgcatttgtggggttattgacagaggaattgagaccatttttgagtttcagtacaac
aagggtaagaggagcacaagaacatacgtttctgaatctcgcaacaaagattcaggcaat
attgttggagttcaaatttcagaagacgatttgactgtaactgaaatttctgcacaccct
aggcatatgaaacaaatgaaacctcatcaaattgagggtttcaatttccttataagcaac
ttggtaagtgataatccaggaggctgcattttggcccacgctcccggatctgggaaaaca
tttatgataatcagtttcatgcagagttttttagctaagtatccacaggctagaccattg
gttgtgcttcccaaaggaatcttggccacatggaaaaaggagtttcaaatttggcaagtg
gaagatattccactctatgatttctattccgttaaagcagataatagggctcaacagctg
acagtactgaatcagtgggtcgagcacaaaagtattctgttcttaggatacaaacaattt
tccacaatcgtctgtgacgttgagaccagtgctgcatcaactgcatgtcaaaatatattg
ctccaggttcctaccattcttatcctagatgaggggcatacaccaagaaatgagaacact
gatactttgcaaactcttgccaaagtcagaactccacgaaaagtggttctttcaggaacc
ctatatcaaaatcatgttaaagaggtattcaatatagtgaatcttgttagaccgaagttc
atgagatcagaaacttctcgacctattatcaaacgcatcatgtcgagagtagatatacct
ggtgtaaggaagcagttcaaagcaggtgtggatgctgccttttatgatctggtggaacat
acgcttcagaaagatacagattttaggaggaaagtgagtgtcatccatgatttacgtgag
atgacaagcaagattctgcattattataaaggagattttcttgatgagctccctggactg
gttgacttcactgtggtgctaaatctcacttctaagcagaagcatgaaggtgaaaaagta
aaaaagtttaacaggaagttcaaaataagctctgctggtagtgctgtttatttgcatcca
aagttgaatgttttctctgttaatgctgctgtaacggatgataaaatagatgaggtcatt
gataaaatggatgttagagatggagtgaagacaaaattctttcttaatatgctgaatttg
tgcgctactactggggagaagctgctggttttcagccaataccttcttcctttgaaattc
atggagagattggttgttcagaagaagggttggagtccaggaagagaaacctttatgata
tctggtgaaacaactcctgagcaacgggaatggtcgatggaacgtttcaacacctcaccc
gatgcccgagtcttctttggctccattaaggcttgtggagagggtatatctttggtaggg
gcatcacgtatcatcatcttggatgttcatctcaatccatcagtgactcgccaggcaatt
ggccgtgcattccgtcctggtcaaacaaagaaagtctttgcatatagattggtggctgct
gattcacctgaagagggagatcacagtacttgtttcaagaaggaactgattgcaaagatg
tggtttgagtggaacgagtattgcggctatcatgactttgaagtggagactgtcgacgtg
aaacagtgtggagataattttctagaaaccccacttctaggacaagatgtcaaagttctg
tacagaaggtag
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