Benincasa hispida (wax gourd): 120089197
Help
Entry
120089197 CDS
T07258
Name
(RefSeq) coatomer subunit alpha-1-like
KO
K05236
coatomer subunit alpha
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bhj04131
]
120089197
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bhj04147
]
120089197
Membrane trafficking [BR:
bhj04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
120089197
Exosome [BR:
bhj04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120089197
Exosomal proteins of bladder cancer cells
120089197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Zn_ribbon_19
Motif
Other DBs
NCBI-GeneID:
120089197
NCBI-ProteinID:
XP_038902537
LinkDB
All DBs
Position
10:48850230..48856280
Genome browser
AA seq
1219 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDVLR
LSQMNADLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTGLQTFRREHDRFWILSAHP
EMNLLAAGHDSGMIVFKLERERPAFAISGDSLFYVKDRFLRLYEFSTQKDSQIIPIRRPG
STSLNQSPRTLSFSPTENTILICSDLDGGCYEFYTIPKDSFGRSDTFQDAKRGLGGSAVF
VARNRFAVLDKSHNQILLKNLKNEVVKKVPIPITADAIFYAGTGNLLCRAEDRIVIYDLQ
QRIILGDLQTPFVRYVVWSNDMESVALLSKHAIIIANKKLVHQCTLHETIRVKSGAWDDN
GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTLFCLDRDGTVRSLIIDATEYI
FKLSLLKKRFDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI
QIAVASATAIDEKDHWYRLGVEALRQGNAGIVEYAYQKTKNFERLSFLYLITGNTAKLSK
MLKIAEVKNDVMGQFHNALYLGDVRERVKILENVGHLPLAYITASTHGLHDVAERLAAEL
GDDIPSLPEGKTSSLLLPPTPVMCGGDWPLLRVMKGIFEGGLDNVGAGRADEDDDEVADG
DWGEELDVVDVDGLQNGDVAAILEDGEGAEENEEEGGWDLEDLELPPEVDTPKVSVSSRN
SVFVAPTPGLPANQAWIQRSSLAAEHAAAGNFDTAMRLLNRQLGIKNFAPLRPIFLDLHA
GSQTYLRAFSSAPIISLAVERGFSESSNANAKGSPALIYSFTQLEEKLKAGYKATTSGKF
SEALRFFLTILHTIPLIVVESRREVDEVKELIIIVKEYVLGLQMELKRRELKDNPVRQME
LAAYFTHCNLQLPHLRLALLNAMTVCYKAKNLACAANFARRLLETNPSTENQAKTARQVL
QAAERNMTDASQLNYDFRNPFVICGATYVPIYRGQKDVSCPYCSSRFVPGQEGQICSVCD
LAVIGADASGLLCSPTQNR
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgaagtttgaaaccaagagtaatagagtcaaaggattgagtttccacagtaag
aggccatggatccttgcaagtcttcacagcggagtgatccagctatgggattaccggatg
ggcacgcttattgatagatttgatgagcatgaggggcctgttcgtggtgttcactttcat
aagtctcagcctctttttgtgtctggaggggatgattataagattaaagtgtggaactac
aagactcataggtgtctatttactcttcttggacatcttgattatatacgtactgtgcaa
tttcaccatgagtatccatggattgtgagtgctagtgacgatcagactattcgtatatgg
aactggcagtcacgtacatgtatctctgtgttgacgggccacaatcactatgtaatgtgt
gcttcattccaccctaaggaagatcttgttgtgtcagcttcccttgatcagaccgttcgt
gtttgggacattggtgccttgaggaagaagaccgtatcaccagcagatgatgtcttgcgg
ttgagtcaaatgaatgctgatctatttggtggagttgatgctgttgttaaatatgtcttg
gaaggtcatgatcgaggggttaattgggcagcattccatccaaccctgccgttgatagtg
tcaggggctgatgatcgacaggtgaaattgtggcgaatgaacgacaccaaagcgtgggaa
gtggacacactaagggggcacatgaataatgtttcatgtgtgatgttccatgccaaacaa
gatataattgtttccaattccgaggacaaaagtattcgtatttgggatgctacaaagcga
actggacttcagacctttcgtagggagcatgatagattttggattctttctgctcatccc
gagatgaatttgttggcagcagggcatgacagtggcatgattgtctttaagctggagaga
gaaagaccggcctttgctattagtggcgattctctattttatgtgaaggaccgctttttg
cgcctctatgagttctccactcaaaaagattcacagatcatcccaattcgaaggcctggt
tccactagcttgaatcagagcccaaggaccctttcatttagccctacagaaaacacaatt
cttatatgctcagatctggatggggggtgttatgaattttacaccatacctaaggatagc
tttggtagaagtgataccttccaagatgcaaagaggggacttggaggatcagcagtgttt
gtggctcgaaataggtttgccgtgctcgataaaagtcacaaccaaatcttgttaaaaaat
cttaagaatgaggttgttaagaaggtccctattcccattactgcagatgcgatattttat
gctggaactggtaatttgttgtgccgagcagaggatagaattgttatatatgatcttcaa
cagagaattattcttggtgatcttcaaaccccttttgttaggtacgttgtttggtccaat
gacatggagagtgttgcattgcttagcaaacatgcaattattattgctaataagaagctt
gttcaccagtgcacacttcatgagacaattcgcgtaaagagtggagcatgggatgataat
ggggtttttatctacacaaccctaaaccacattaagtattgcctcccgaatggagatagt
ggtataatcagaaccctcgatgttccaatatatattacaaaggtttctgggaatactctt
ttttgcttggatagggatggaacagttcgatcgttaattattgatgcaacagaatacata
ttcaaactctctctcttgaagaagagatttgaccatgtcatgagcatgataaggaactcg
cagctctgtgggcaagcaatgattgcatatttgcaacaaaagggatttcctgaagttgca
cttcactttgtgaaagatgagagaaccaggttcaatttggctctcgagagtggaaacatt
cagattgcagttgcatctgctacagcaattgatgagaaagatcattggtataggctgggt
gtggaggctcttcgccaaggcaatgcaggcattgtggaatacgcctaccagaagacaaaa
aattttgagaggttatcattcctttatctcataactggtaacacagcaaaactgtccaag
atgttaaagatcgccgaagttaagaatgatgtcatgggtcaatttcacaatgctctatat
cttggtgatgttcgcgagcgcgtaaagatcttggagaatgttggccacttacctcttgca
tacatcacagcatcaacccacggtttacatgatgtagctgaaaggctagctgctgaattg
ggagatgatattccatctttaccagaaggcaagacctcatcccttctcttgcctcctact
ccagtcatgtgtggtggtgattggccacttctgagagtcatgaaaggaatatttgaaggt
gggctggataatgtgggtgcgggtcgtgctgatgaagatgatgatgaggtcgcagatggt
gattggggtgaggagctggatgtggttgatgtcgatggcttacagaatggggatgtggca
gcaattttagaggatggggaaggtgcagaagaaaatgaggaagaagggggatgggacctt
gaagatttggagcttccacctgaagttgacactccaaaagtatcagtcagctctcgcaat
tcagtttttgtggctccaactcctggcctgcctgccaaccaggcttggatacagaggtcg
tcccttgctgcagaacatgctgctgctggtaattttgatactgcaatgcggttgcttaac
aggcaactaggaattaaaaactttgctcctttgagacccatattcctcgatcttcatgct
gggagtcaaacctatcttcgtgctttttcatccgctcccataatatcgttagcagttgaa
cgaggattcagtgaatctagtaatgcaaatgcaaaaggatctcctgcacttatatacagt
ttcactcagttggaggagaagcttaaagctggttacaaggccacaacatcagggaagttt
tctgaggctcttcgtttttttcttactattcttcataccattcctctgattgttgtcgag
tctaggagggaagttgatgaggtaaaggagttaattattatcgttaaagagtatgttttg
ggtttgcaaatggaactgaagaggagggaactcaaggacaatccagtacgtcaaatggag
cttgcagcctattttacgcactgcaaccttcagttgccacatttgaggcttgctctatta
aacgctatgactgtctgttacaaggctaagaaccttgcctgtgcggcaaacttcgctcgc
agacttcttgagactaatccttcaactgagaatcaagctaagacagccaggcaagtgctg
caggctgcagagaggaacatgacagatgcctcccaactgaattatgactttagaaaccca
ttcgtgatctgtggtgcaacttatgtgccaatttaccgaggtcagaaggatgtttcttgc
ccatactgtagttccaggtttgtaccaggtcaggaagggcaaatttgctctgtttgtgat
cttgctgttattggagcagatgcgtctggtttactttgttctcccactcaaaatcgatga
DBGET
integrated database retrieval system
