Benincasa hispida (wax gourd): 120089382
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Entry
120089382 CDS
T07258
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03013
Nucleocytoplasmic transport
bhj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120089382
03015 mRNA surveillance pathway
120089382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120089382
03041 Spliceosome [BR:
bhj03041
]
120089382
Messenger RNA biogenesis [BR:
bhj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120089382
Spliceosome [BR:
bhj03041
]
Complex C
Other components
EJC/TREX
120089382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
120089382
NCBI-ProteinID:
XP_038902762
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All DBs
Position
1:complement(34661503..34665759)
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AA seq
425 aa
AA seq
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MGTNAAAVEKTEDDLRKEIDELQRQQREITERLRDPRGLRRVGFAGPGPRNFAANGPRRG
FVRPGERNDAEDQPPAKRRLSSAVVKMEEDGEINEEAEGKDAMKDTSREETSGSDTAFQN
DVKQNHLRQSGSFRLDGNRRGARMDFEVPAAENVPRILPKNEDPSLVSRNKRMLGQLLGT
LEKFRKEDKQLSGTEAFMRRSDSLQRAEQRAREESERLRQQEREQIAEKRKRDLMLRARV
AAKAEEKKLELLFLRWSEHHKKLCNFIRTKTEPSIYYLPNKPLDEDATLAEQRRDEAFME
WKTSRREELSEYQKQIGEQYIANVEKDLERWQNARRARKGNNDVSNLQETMDKELDTHRL
EHGPKKRNIPGGSNNEDEDDVEDINVGEDDMIDDVLGVEDNGRRGEETAKPEADVASPKA
DNTVQ
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgggaactaacgccgctgccgtcgagaaaacggaggacgatcttcgcaaagagatcgat
gagcttcaacgtcaacaacgggagattacagaacggcttcgtgatcctcgcggactccgg
agggtgggatttgccggacctggcccaagaaacttcgccgctaatggaccacgtcgggga
tttgttcgacctggggaaaggaacgatgctgaagaccagcctcctgctaagcggcggcta
tcatctgctgttgttaagatggaggaggatggggagataaatgaagaagctgaaggaaag
gatgcaatgaaggatacatctcgggaagaaacttctggaagtgatacagccttccagaac
gatgtgaaacaaaatcatttacggcagagtggttcatttagattggatgggaatagaaga
ggagccaggatggattttgaagttccagcagcagaaaatgttccaaggatattgcctaag
aatgaggatcctagcttagttagcaggaacaagagaatgctgggtcagcttttgggaacg
ttagagaaattcaggaaggaagacaagcaactctcaggaacggaagcttttatgagaaga
tcggattccttacaaagagctgagcaaagggcacgagaggaaagcgaaagattgaggcaa
caagagcgtgaacaaattgcagagaaacgaaagagagatctgatgctcagagctcgcgtg
gctgccaaggcagaagaaaagaagttggaattactttttcttcgatggagcgagcatcat
aagaaactttgcaattttataaggacaaagactgaaccttcaatttattatttgccaaat
aaaccattggacgaggatgcaaccttggccgagcagcgaagagacgaggcttttatggag
tggaaaacctccagaagggaagagttgtccgagtatcagaaacagataggagaacagtat
attgcaaatgttgagaaggacttggagaggtggcaaaatgccaggagggcaagaaaagga
aataacgatgtatcgaatttgcaggaaaccatggacaaagaattggacacccatagactt
gagcatggtccaaagaaaaggaatatccctggtggtagcaacaacgaggacgaggatgac
gtggaagatattaacgttggagaggatgacatgatagatgacgtacttggtgttgaagat
aatgggcgtaggggcgaggaaacagcaaaacccgaagctgatgttgcaagtccaaaagct
gataatactgtgcagtag
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