Benincasa hispida (wax gourd): 120089462
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Entry
120089462 CDS
T07258
Name
(RefSeq) oligoribonuclease isoform X1
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120089462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120089462
03009 Ribosome biogenesis [BR:
bhj03009
]
120089462
Messenger RNA biogenesis [BR:
bhj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
120089462
Ribosome biogenesis [BR:
bhj03009
]
Eukaryotic type
Pre-60S particles
RNases
120089462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
120089462
NCBI-ProteinID:
XP_038902868
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Position
10:9842349..9851675
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AA seq
253 aa
AA seq
DB search
MAMKPLVNAFSVLELDAEDDQIPALSTSSKDDATASSPSRTGKSKKEVNISGDILTGEKQ
KQGQPDVAAENYKFPLVWIDLEMTGLHVETDRILEIACIITNGSLTKLVEGPDLVIHQSK
ECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMD
FIFLKKYMPDLAGLFSHVLVDVSSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMEL
KYYKDNIFKNSKK
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgaagccacttgtaaacgcattctcagtgttggagctcgatgctgaagacgat
caaattcccgctctttctacttcctccaaagatgacgctactgcttcttccccttcaaga
acaggaaaaagcaagaaggaagttaatatctctggtgatattctgacaggagaaaaacag
aaacaaggtcaaccagatgtagctgcagaaaactacaaatttcctcttgtttggattgac
ctggaaatgactggtttacatgttgaaacagatagaatactggagatagcttgtataatt
accaatggcagtctgaccaaattggtggagggtcccgatttagtgattcaccaatcaaaa
gaatgtctagagaaaatgggagaatggtgtcaaagtcatcatgcagccagtggattgaca
aaaaaggtgctgcaaagtacaattagtgaaagagaagctgaaaaacaggttatagaattt
gtgaagaaacatgttggtagctataaactacacttggctggaaattcagtttatatggat
tttatttttttgaagaaatacatgccagatttggctggacttttttcacatgtgcttgtt
gacgtcagtagtgttaaggctctatgctttcgctggtatccaagagatcagaagaaagca
ccaccgaaagagaataaacatagggctatggatgatatcagagaaagcattatggaactc
aaatattacaaggacaatatatttaagaattctaaaaagtga
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