Benincasa hispida (wax gourd): 120089487
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Entry
120089487 CDS
T07258
Name
(RefSeq) nuclear pore complex protein NUP98A
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120089487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120089487
03036 Chromosome and associated proteins [BR:
bhj03036
]
120089487
Messenger RNA biogenesis [BR:
bhj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120089487
Chromosome and associated proteins [BR:
bhj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120089487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
120089487
NCBI-ProteinID:
XP_038902900
LinkDB
All DBs
Position
10:40470561..40483315
Genome browser
AA seq
1013 aa
AA seq
DB search
MFGSPNPFGQPSTSPFASQPVFGQTANASNNPFAPKPFGSTSPFGSQTGNTVFGGTSTGV
FGAAQSSSPFPSTTTFGGSSSPAFGSTLSTFGSSSTPAFGSSSSSSFGGSSIFGQKPLFG
GFGSTPTQTNPFGSTNQQSQPAFGSNVFGSPSPFGAPSQSAFGATSTPAFGTTSNPAFGA
ASTPAFGATSTPAFGAASTPAFGATSSPAFGSTSTPAFGSTGNAFGSLSTPVFGSGGGFG
ASSTPAFGASSTPAFGASSAPAFGASSTPSFSFGSTPAFGQSTSAFGSSTFGTSTSPFGA
QSSPFGAQSTSTFGTSGFGQAGFGGQRGGSRVTPYAPTTEPDAGSGSTQAAGKLESISAM
PVYKDKSHEELRWEDYQLGDKGGPLPAGQSAGGAGFGVSSAQPNPLAPSTFGQSSPNPFS
TATSTNPFAPKPSGFGTFGPSTTFSFNSSAFAPSSSSNPFASTTAASTSAFLSSTTSQFG
SSSLFSSSNTQPLASQSAFSSTTSPGTNLTFPSSLNFGNTQSSSLFQSTTPAIGQTGPAF
GAPFSQSSLFSQPSSGVGGNLFSSSPSLLTSSNPMGFGQTSTSFSMPFQPAQAQAPTSFF
SNLGQAQPIGSSGFGGTSSIFGQSTFGQSPITQSSVVQPAPATNPFGTLPAMPQMSISRP
GAAPSIQYGISSMPVVDKAAPVRISSFLTPRHLSHRRMRLPVRKYNPKNDGSPRVPFFSD
DEETPSTPKADALFIPRENPRALVIRPTDQWPSKANLDKSLPSKDTTVRENGKIAEHTSS
AVNKLKDTNGNVVENGTSKDNIHLNKVNQKPNGVHEDHSAPKEDLYRTFAGHRAGEAAIV
YEHGADIEALMPKLRHSDYYTEPKIQELAAKERAEPGFCRHVKDFVVGRHGYGSIKFFGE
TDVRRLDLESIVQFNNREVIVYLDESKKPPCGQGLNKPAEVTILNIKCVDKQTGHQYTEG
PKVEKYKELLRKKTEAQGAEFVSYDPVKGEWKFRVEHFSRYNMEDNEELEDWE
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttctcccaacccttttgggcaaccatctactagcccatttgcatctcaacca
gtctttgggcagactgccaacgcaagtaataatccttttgcaccgaaacccttcggcagt
acatccccatttggctcacagacaggaaatacagtatttggtggtacatcaacgggagtg
tttggggcagcccaatcttcttctccctttccttccaccacaacgtttggtggttcatca
tcaccagcttttggatctactttgtctacttttggatcatcatcaactcctgctttcggt
agttcatcatcttcatcatttggaggttcttccatttttgggcagaagcccttgtttgga
ggctttggatctactcctactcaaacaaatccatttggaagtacaaaccagcaatctcag
ccagcatttggaagcaatgtctttggttctccatcaccttttggtgcgcctagccagtct
gcatttggagctactagcacccctgcctttggtaccacaagcaaccctgcctttggtgcc
gcgagcacccctgcatttggcgccacaagcaccccagcatttggtgccgcaagcacccca
gcgtttggcgctacaagcagtcctgcctttggctcaacaagcacacctgcctttggtagt
actgggaatgcatttggttcactaagcacccctgtttttggatctggaggtggatttggt
gcttctagtactcccgcttttggagcttcaagtactcctgcttttggggcttcaagtgct
cctgcttttggagcttctagcactccgtcctttagctttgggtccactccagcttttgga
cagtctacttctgcatttggtagtagtacttttggtactagtacatccccttttggtgcc
cagagttctccttttggagcacagtcgacatctacatttgggaccagtggttttgggcaa
gctggttttggtggtcagcgaggtggcagtagagtcactccttatgcaccaacaactgag
ccagatgctggaagtggcagtactcaagcagctggaaagttggagtctatatccgccatg
cctgtctacaaagataaaagtcacgaagagttgagatgggaggattatcaattgggggac
aaaggtggacctcttccagctggtcagtctgctggtggtgctggctttggtgtttctagt
gcacagcccaaccctctagctccttcaacatttggtcaatcaagtccaaatcctttttct
acagccacatcaaccaatccatttgcccccaaaccttcgggttttggtacttttggacct
tcgacgacgttttcatttaattcttcagcatttgctccctcctcttcatcaaaccccttt
gcatcaactacagcagcatcaacgtcagcttttttatcgtcaacaacctctcaatttggc
agctcatccttattcagttcatctaacactcaaccccttgcctcacaatctgcttttagt
tcaactacatctccaggaacaaatcttacgtttccgtccagcttaaattttggtaatact
caatcatcttccctcttccaatccacaacacctgcaattgggcagacaggtccagctttt
ggcgctcccttttcacaatccagcttgtttagtcaaccttcgtctggggttggagggaat
cttttctctagctcgccatcactcctaacttcaagcaatccaatgggttttggtcaaaca
tctacctctttctctatgccttttcaaccagcacaagcacaggcacccacttcctttttt
agcaacttgggtcaggctcaaccaattggttcaagtggttttggaggcacttcaagcatt
tttggccagagtacctttggacaatcgcctatcacccaaagctccgtagtacaaccagca
ccggctacaaatccatttgggacactccctgcaatgccacagatgtcaattagtagacca
ggagcagcaccttctattcaatatggaatttccagcatgccggttgttgacaaagcggct
ccagtcagaatatcatctttcttgacgcctcgccacctatctcacagacggatgagattg
cctgtgagaaaatataaccctaagaacgatggcagtccaagggttccatttttcagcgat
gatgaagaaacaccaagcactcctaaggccgatgctctttttattcccagagagaatcct
agagcattggttattcgtcccacggatcagtggccttcaaaagccaatttagataaatct
ttgccatcaaaggacaccacagtgcgtgaaaatgggaagattgctgaacatacttcctcg
gctgtcaacaaattgaaggataccaatggaaatgttgttgagaatggtactagcaaagac
aacatccatcttaacaaagttaaccaaaaacccaacggggtccatgaagatcactctgct
ccaaaggaggacttgtataggacatttgcagggcacagagctggtgaggcggccattgtt
tacgaacatggggcagatattgaggcattaatgccaaagctccggcattcagactattat
accgagccgaaaattcaagaattagctgccaaagaaagggccgaacctgggttttgccgc
catgttaaagattttgtggtgggtcgtcatggttatggaagcatcaaattctttggtgaa
acagatgtgcgaaggctcgatctagagtccatagttcagttcaacaatcgggaagtgatt
gtctacctcgacgagagtaaaaagcctccttgtgggcaaggtctgaataagcctgctgaa
gtaacaatactcaacatcaaatgcgtagacaagcaaactgggcatcaatatacagaaggg
cctaaagttgagaaatacaaggagttgctaaggaagaagacagaggctcaaggtgccgag
ttcgtatcgtacgatccagtgaaaggagagtggaagttcagggttgaacacttcagcagg
tataatatggaagataatgaggaacttgaagattgggaatga
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