Benincasa hispida (wax gourd): 120089687
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Entry
120089687 CDS
T07258
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120089687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhj03021
]
120089687
03036 Chromosome and associated proteins [BR:
bhj03036
]
120089687
Transcription machinery [BR:
bhj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120089687
Coactivators
SAGA/TFTC/STAGA complex
120089687
Chromosome and associated proteins [BR:
bhj03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
120089687
STAGA complex
120089687
TFTC complex
120089687
SAGA complex
120089687
SLIK complex
120089687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CEP76_N
Motif
Other DBs
NCBI-GeneID:
120089687
NCBI-ProteinID:
XP_038902978
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Position
11:12574014..12578819
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AA seq
533 aa
AA seq
DB search
MSVVPKESIEIVAQSIGISNLSPEVALALTPDVEYRVREIMQEAVKCMRHSKRTVLSSVD
VDNALKLRNLEPIYGFAACDSLQFKRAVGHKDLFYIDDKDVELNNVIESPLAKATVDTSV
VAHWLAVEGVQPAVPENLPTEEPHDGKKSDLKEEELPYDTKPPTKHVISRDLQLYFEKIT
GLILNKSGSILFREALRSLAVDSGIQPLLPYFTCFIADEVSKNLCNCQLLIALMRMVWCL
LRNPQIHMAPYLHQLMPSIITCLVAKQLGKRLSDNHWELRDLAASLVSLICKRFGHVYHN
IQPRVTKTLLHVFLDPSKLLPQHYGAVQGLADLGPDVVRQFILPNLEPYMQYLEMEKQKN
EMRRHEAWQVYRTLLHAAGKCMHGWLKVFPLSPSPPMRSTLKINTNINGKIVKTISNKRK
ASSDNSVQQPAPKKMATDSTLGAIPMNSMIVDMQGATTGLPTPLGGSNIGVGRNFPNETR
PGREGELGFKGSTALALAWKEDLGAGPLLTSLFPLFGEDLFSFIPKPELSFFL
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgttccgaaagagtcgattgaaatcgttgcgcagagcattgggatttccaac
ctttcccctgaggttgctcttgcactcactcctgatgtcgagtaccgggtccgtgaaatc
atgcaggaggcagttaaatgtatgcgtcattcaaagcgaactgttctctcttccgttgat
gttgataatgcacttaaattaagaaacttagagccaatatatggctttgctgcatgcgat
agtttgcagttcaaaagagctgttggacacaaggatctcttttacattgatgacaaggat
gtggagttaaataatgttattgagtcacctttagcaaaagcaacggttgacacatcagtt
gttgctcactggctggcagttgaaggtgttcagcctgcagttccagagaacttgccgact
gaagaaccccatgatggaaagaaatccgacttgaaggaggaagaacttccttatgacact
aaaccacctactaagcatgtgatttcaagggaccttcagctttactttgagaaaataacc
ggtctgatcttgaacaagtctgggtctattctctttagagaagctttaaggagcctggca
gttgactcaggaattcagcctttgcttccatacttcacgtgcttcattgccgatgaggtt
tcgaaaaatctatgtaattgtcaactcttgattgctttgatgaggatggtctggtgcctt
cttcgaaatccccagattcatatggcaccttatttacaccaattgatgccgtccatcatt
acctgccttgttgccaaacaattaggtaaaagattgtctgacaatcattgggagcttaga
gacttagcagcaagcctggtttctttgatatgcaaaagatttggacatgtttatcacaat
attcaacctcgtgttacaaagactcttctccatgttttcttggacccctcaaaattattg
cctcagcattatggtgcagttcaggggctagcagatcttggtcccgatgtggttcgccag
tttatactaccaaatcttgaaccgtatatgcaatatctagagatggagaagcaaaagaat
gaaatgaggaggcatgaagcttggcaagtttataggacgttactgcatgcagctggtaaa
tgtatgcatggttggttgaaggtttttcctctctctccatctccaccaatgcgtagtact
ttgaagataaatacgaatatcaatgggaaaatcgtgaagacaatttcaaataaacgcaaa
gccagttcagacaactcggtgcagcaaccagcacccaaaaagatggcaacagatagcaca
ttgggcgcaatcccgatgaactccatgatagttgatatgcaaggagctacaactgggctc
ccgacaccactcggaggttcaaacatcggcgtcggtcgaaatttcccaaatgaaacaagg
ccaggtagggaaggtgaactaggctttaagggttctactgctcttgctctagcatggaaa
gaagatttgggtgctgggccattgctgacttcgctttttccactttttggggaagatctg
ttttccttcatcccaaaacctgagctatccttctttttgtga
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