Benincasa hispida (wax gourd): 120089712
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Entry
120089712 CDS
T07258
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhj03021
]
120089712
Transcription machinery [BR:
bhj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
120089712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Motif
Other DBs
NCBI-GeneID:
120089712
NCBI-ProteinID:
XP_038903010
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Position
1:29672762..29676977
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AA seq
509 aa
AA seq
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MGVVTVSSSAARSPFRLGAKFTNHNSTLKRPSIVAFKADKHTNTTLVSPHEQVTLPVESN
NINKKRSGKTSKPLKRVKAVLIDEATPCTLDVDYNEAAAKLENIFKLSPVTEDTDMESKD
GRSKRGQQRRKKSDKRQSDGIVRNQTKRIKRLDLDKRIALRSNKEGKAAPSLRKQKDTKN
EDDEIDCLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLVQPMKALIQVQEELQKE
LGREPTEGELANVTNMNVIQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFEDFASGPKF
QDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVE
IQKAKLELSCELHRLPTEEEIIAKVGISPERYLEVMRATKPVYSLHSKHSTTSEEFINGI
TDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNIS
REMVRKHEVKALMKLKHPARVDYLRRYLV
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcgtgactgtttcaagctcggcagcacgaagtccttttcggctgggtgcaaaa
tttactaatcacaattctacattgaaaagaccatcgattgtcgcttttaaagcggataag
cacacaaacacaactttggtctcaccgcacgagcaagtaaccctgcctgtggagagtaat
aacataaacaagaaaagatcaggaaaaactagcaaacctttgaagagagttaaagctgtc
ttgatcgatgaagctactccatgtactttggatgtggattacaatgaggctgctgctaaa
cttgaaaacatattcaagcttagccctgtgacagaggatactgatatggaaagtaaagat
ggcagatcaaaaagaggacagcaaaggaggaaaaaatcggacaagagacaaagtgatggc
atagtcaggaaccagactaaaaggattaagcgactagatctcgataagaggatagcactg
agaagtaacaaggagggcaaagcagctccttcattaaggaaacaaaaagataccaaaaat
gaagatgatgagattgattgtcttgtaagagactactctgcttcaactgatttggttagt
ttagactggaaaaaaatgaagattcctcccgttcttccttcatcagagcatactcgtttg
ttcaagttggttcaaccaatgaaggcacttattcaagtacaagaagagctgcagaaagag
ttgggaagagaaccaactgaaggagaattggcgaatgtgacaaatatgaatgtaattcaa
gtaaggagacaattggaggttggtcgtgctgccagaaacaagctcatcaagcacaatctc
cgccttgtattatttgtaatcaacaaatactttgaagattttgcaagtggcccaaaattt
caagacctttgtcaagcaggagtcaagggactcattacagcgattgatcgatttgagcca
aagaggaaattccggctatcgacttatgctttattttggataaggcatgctattattcgg
tcaatgactttgtcaagcttcacacgtgtctcatttggacttgactcggtaagagttgaa
attcaaaaagctaaactcgagttatcatgtgagcttcatagattaccaacagaggaagag
ataattgcaaaagttggcatctcacctgagaggtacctagaagtaatgagggctacaaaa
ccagtttactctctccattctaagcattcaactacatcagaagagtttatcaatgggatc
actgatgtagaaggtaccggaggcgacaaccgaaggcaaccagctcttctgaggcttgct
ttagacgatgtgcttgattctcttaagccaaaggagagcttggtgattagacagagatat
ggtctcgatggcaaaggaaaccgaacattaggtgagatagccggaaatctaaatatttca
agggaaatggtccgaaagcatgaagtgaaagctctcatgaagctcaagcatcctgcaaga
gtggattaccttcgacgatatttagtctga
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