KEGG   Benincasa hispida (wax gourd): 120090003
Entry
120090003         CDS       T07258                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
bhj  Benincasa hispida (wax gourd)
Pathway
bhj03020  RNA polymerase
bhj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bhj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    120090003
  09124 Replication and repair
   03420 Nucleotide excision repair
    120090003
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bhj03021]
    120090003
   03400 DNA repair and recombination proteins [BR:bhj03400]
    120090003
Transcription machinery [BR:bhj03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     120090003
  RNA polymerase III system
   RNA polymerase III
     120090003
  RNA polymerase I system
   RNA polymerase I
     120090003
DNA repair and recombination proteins [BR:bhj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      120090003
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N
Other DBs
NCBI-GeneID: 120090003
NCBI-ProteinID: XP_038903402
LinkDB
Position
11:76502064..76508355
AA seq 227 aa
MEEDGFEGEPNEVEFGTCLSSYIDNGTTESHRYFLSRRTVLEMLRDRGYTLNSSDIDLSL
QQFREIYGQSPDVDRLKLSAVHRSDPSKRVLVIFCGTGAVKVNAIRNIAGQIANKDSLHG
LILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLSEEEKQKLLQQY
SIEEKQLPRMLRMDAVARYYGLEKGQVVKVTYDGDMTRSHVTYRCVW
NT seq 684 nt   +upstreamnt  +downstreamnt
atggaggaagatgggtttgagggagagccgaatgaagtggagtttggcacttgcttgagt
agctacatcgacaatggcaccactgaaagccacagatactttctttctcgcagaacagtc
ttggagatgcttagggaccgaggttacactctcaactcctctgatatcgacctctctctt
caacaattccgagaaatttacggtcaatcccccgacgttgatcgccttaaactatccgcc
gttcatcgctccgatccctccaaaagagtcctcgtgatattttgtgggactggtgctgtg
aaagttaatgctattcgcaatattgctggccaaattgctaataaggactctttgcatggt
ctcattctaattgtgcaaaatcaaattacaaaccaggccatgaaagcagttgagcttttc
tcgttcaaggttgaaatattccagattactgacttgctcgtcaatatcacaaagcatgcg
ttaaagccaaaccatcaagtactatcggaggaagagaaacaaaaacttttgcaacaatac
agtatagaggaaaaacagcttcctcgtatgttacgtatggatgctgttgctcgatattat
ggacttgagaaagggcaggttgtgaaagtgacttacgatggcgatatgactaggtcacat
gtaacttatcgttgtgtttggtga

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