KEGG   Benincasa hispida (wax gourd): 120090144
Entry
120090144         CDS       T07258                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
bhj  Benincasa hispida (wax gourd)
Pathway
bhj03018  RNA degradation
bhj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bhj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120090144
  09123 Folding, sorting and degradation
   03018 RNA degradation
    120090144
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bhj03019]
    120090144
   03041 Spliceosome [BR:bhj03041]
    120090144
Messenger RNA biogenesis [BR:bhj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     120090144
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     120090144
Spliceosome [BR:bhj03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    120090144
SSDB
Motif
Pfam: LSM DUF150_C Hfq
Other DBs
NCBI-GeneID: 120090144
NCBI-ProteinID: XP_038903588
LinkDB
Position
11:complement(40914440..40919093)
AA seq 99 aa
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAIEFLRDPDDPLKT
TDQTRPLGLIVCRGTAVMLVSPVDGTDEIANPFIQPDGA
NT seq 300 nt   +upstreamnt  +downstreamnt
atgtctggaagaaaagaaactgttctggatttggctaagtttgtagacaaaggcgtccaa
gtgaagcttaccggcggcagacaagttactggaacgctcaaaggatatgatcaattgcta
aaccttgtgctggatgaagctatagagtttctaagagatcctgatgacccattgaagaca
actgatcaaaccaggcctcttggcctaattgtctgcagggggactgctgtaatgcttgtg
tcgccagttgatggtacagacgagattgctaaccccttcatccaaccagacggtgcatag

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