Benincasa hispida (wax gourd): 120090188
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Entry
120090188 CDS
T07258
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
120090188
Enzymes [BR:
bhj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
120090188
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
120090188
NCBI-ProteinID:
XP_038903648
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Position
11:26891371..26900868
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AA seq
681 aa
AA seq
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MKLWGNLALWFTAMAAVFFLFCFDHNGYRSPIPTTPIRRYLRDMDINNSSRLFNVTLHRQ
GGYVIMDNGIVQVTLSTPDGDIVGLSYNGIDNILETKNEEQNRGYWDAVWNNPDEPISTD
RLKGESFEMIIANEEQLEISFNKTWSFAVGNETAPVNVDKRYVLLRGSSGFYSYAIFERP
IGWPQIEMDQVRIVYKLQSTMFDYMAVSDDRQRVMPTMGDRENGEPLAYPEAVLLTNPAN
QELRGEVDDKYQYSTEDKDNQVHGWICSDPPVGFWMITPSDEFRVAGPVKQDLTSHAGPI
TLSMFVSTHYAGKDIGMRFAAGEPWKKVFGPVFVYLNSVSPEEDSLSLWQDAKQQLAIEI
NEWPYSFPQSEDFPSSAQRGSVAGRLLVYDGYVSSRLMWASNAFVGLALPGPVGSWQMET
KGYQFWTRADNHGNFLINNIRAGVYSLYAFVPGFIGDYKYEANITIELGSEISLEVMVFD
PPRQGPTIWEIGIPDRTAAEFYVPDPYPTLMNKLYNNHADKFRQYGLWERYAAMYPNNDL
VFTVGVDDYTKDWFYAHVNRNVGNQTYEATTWEIRFLLQSVNQTANYTLQIALASAAECE
LQVRLNDQESEQAAFSTGKIGKDNAIARHGIHGLYWLYSIPFPGDQFLQWNNSIYLTQAR
SESPFEGLMYDYIRLEAPPLT
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatggggtaatttggccctctggttcacagccatggctgccgttttcttcttg
ttctgtttcgaccacaatggctaccggagtccgattccgaccaccccaataaggagatac
ctaagggacatggacatcaacaattcttcgaggcttttcaatgtcacactacacagacaa
ggtggatatgttataatggacaatggtattgtccaagttactctttcaactcctgatggc
gacatcgttggattaagctacaatggaatcgacaacattctcgaaaccaaaaacgaagag
caaaacagaggctactgggacgccgtatggaacaacccagacgaacccatttccaccgac
agattaaaaggagagagttttgaaatgataatagcgaacgaggagcaacttgaaatatcg
tttaacaaaacttggagttttgcagttgggaacgagacggcacctgtaaatgtggacaaa
aggtacgtattgctgagaggaagctctggattttatagttatgcaatattcgagaggccc
attggatggccccagattgaaatggatcaagttaggattgtttacaagcttcaaagcaca
atgtttgattatatggctgtgtcggacgataggcaaagagtgatgccaacaatgggagac
cgtgaaaatggtgagccattggcttatcctgaggctgttcttttgactaatcctgccaat
caagaactcagaggagaggtggatgacaagtaccagtactcaacagaggacaaggacaac
caagttcacggctggatctgcagcgatccgccggtgggattctggatgatcactcccagc
gacgagttccgtgtcgctggtccggtcaagcaggatctcacctctcacgccggccccatc
actctctccatgttcgttagcacccactacgctggaaaggacattggtatgagatttgca
gctggagagccctggaagaaggtcttcggccctgtctttgtctatctcaactctgtttcc
cctgaagaggattctttatccctgtggcaagatgccaaacaacagttggcaatagaaatc
aacgagtggccctactcttttcctcaatcagaagacttcccttcttctgcccaaagaggg
agcgtcgcaggccgattattagtctatgatgggtatgtcagtagccgacttatgtgggcg
agtaatgctttcgttggattggcattgcctggtcctgtgggatcttggcaaatggaaacc
aagggctatcagttctggactcgagctgacaatcacggcaacttcttaatcaataacatc
cgagctggggtttacagtctgtacgcttttgtccctggcttcattggagactacaaatac
gaggcaaatattacaattgagcttgggtctgaaatcagtttggaagtgatggtgtttgat
ccaccgagacaaggcccaaccatttgggagattggcattcccgaccgcactgcagcggag
ttttatgtgcccgacccttatccgactctcatgaataaactatacaacaaccatgctgac
aagttcagacaatatggtttgtgggaacgttatgcggctatgtatccaaataatgatctt
gtgtttaccgttggtgtcgatgattatacaaaggattggttctatgctcatgttaatagg
aatgtgggaaatcaaacatacgaagcgaccacttgggagatcagatttttattgcaatct
gtgaatcaaacggcaaattacacactgcaaattgcattagcatctgctgctgaatgcgaa
ttacaggttcgattaaacgatcaagaatcagagcaggctgcgttctcgacagggaagatt
ggaaaggacaacgcgatcgcaaggcatggcattcatggactttactggttatattccata
cctttccctggcgatcaatttctgcaatggaacaactccatctatctcactcaggcaaga
agcgaaagcccattcgaaggtctcatgtatgactacattcgacttgaagctccacctcta
acatga
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