Benincasa hispida (wax gourd): 120090370
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Entry
120090370 CDS
T07258
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2 isoform X1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120090370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhj03021
]
120090370
Enzymes [BR:
bhj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120090370
Transcription machinery [BR:
bhj03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
120090370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
120090370
NCBI-ProteinID:
XP_038903912
LinkDB
All DBs
Position
11:6400623..6470671
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AA seq
1158 aa
AA seq
DB search
MVVKLPEDDSKNGEQGDDLNPIDSDIDKQFLGLPIKSAVDKFQLLPEFLKVRGLVKQHLD
SFNYFVNTEIKKIVKANDRIESSTDPSIYLRFLDVRIGEPSVTVNAVSETINPHMCRLSD
LTYAAPILVDIEYIEESHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECP
LDPGGYFIIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEK
IYLQLNIFTTPKIPIMVVLKAMGMESIQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQE
QALEYLETKVKKFQFASAPPEKEGRALGILRDVFLANVPVHKNNFRPKCIYVAVMMRRMM
DAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFD
FSQHLNSNIISFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEK
SRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVE
DLELLSAEELHTPNSFLVIFNGRILGKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQH
CVYIASDGGRVCRPLVIADKGVSRIKEYHMKELSDGVRTFDDFLRDGLIEYLDVNEENNA
LIALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQ
LRRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS
LDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRNEDFTGNMQILDDDGLAAPGEIIRPN
DVYVNKQSPIITKGSPLPGIPDSAYRPCRQIFKGSEGEPTVVDRVALSTDKNDCLCIKFL
IRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMI
ELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQ
AYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG
ASMLIYERLMISSDPFEVQVCRVCGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLL
IQELQSMNIVPRLKLAEA
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtgaagctgccagaagacgattcgaagaatggggagcaaggtgacgatcttaat
ccaatcgattctgacatcgataagcaattccttggccttcctatcaagtcagccgtcgat
aagtttcaacttcttcctgaatttttgaaggtaagaggtctggttaagcaacacttggat
tcgtttaactacttcgtgaatacagagataaaaaagatagttaaggccaatgatcgcatt
gaatctagcactgatccgagtatttatcttaggtttttggatgtgagaatcggtgagcct
tctgtgacggtgaatgctgtcagtgaaactatcaatcctcacatgtgccgcttatctgac
ctaacatatgctgctccaatactagttgatattgagtacattgaagaaagtcatgcacaa
aaagccccaagggagaagaaagatgtcgtcattgggagaatgcctataatgttacgaagt
cgttgttgtgtcttacatggaaaagatgaggctgaacttgcgagacttggtgagtgccca
cttgatcctgggggctattttataatcaagggaaccgaaaaggtagttttgattcaagaa
caactttcaaagaacaggattatcattgatactgacaaaaaggggaatataaatgcatct
gttacaagcagcactgaggcaacaaaaagtaaaacagttattaagatggaaaatgagaag
atttatcttcagctcaatatatttactacaccgaagattcccattatggtggtcttgaag
gctatgggaatggagagtattcaagaagttgtgcaaatggttggaagggatcctcgatat
ggagccctacttctgccatcaattgaggaatgtgctaaggagaaaatatatacacaagaa
caagcattagagtatctcgagacaaaggtgaagaagtttcaatttgctagtgctcctcca
gaaaaggaaggaagggctctagggatacttcgtgatgtttttcttgccaatgtccctgtg
cataagaataacttccgtccaaaatgcatatatgttgcagttatgatgagacggatgatg
gatgcaattttgaataaggatgctatggatgacaaggattatgttggcaacaaacgtttg
gagctatctggtcagttgatctctttactttttgaggatttattcaagacaatggttagt
gaagtgaagaagacaattgataagcttcttggaaagcacagtaggtcaagtcggtttgac
ttctcacagcatctgaattcaaatattatttcatttgggctagaaaggaccctttcaact
ggtaactgggatgtcaaaaggttcaggatgcatcggaaggggatgagtcaggttcttgct
aggttatcttttatttctactatgggccatgtgactagagtctcccctcagtttgagaag
tccaggaaagttagtggaccaagagcattacaacctagccagtggggtatgctttgccca
tgcgatactccagaaggtgaggcttgtggactggtaaaaaacttggctctgatgactcat
gtaacaacagatcaagaagaaggcccattaatttctttgtgctattgtttgggtgtcgaa
gacttggagcttctttctgcagaagagctacacacaccaaattcctttcttgttattttt
aatggacggattcttgggaagcatcggaggccacagtattttgctactggtatgagaatg
ctgaggagagctggaaaaattggcgagtttgtcagtgtctttgtgaatgagaagcagcac
tgtgtatacattgcttctgatggaggacgagtttgccgtccacttgtcattgctgacaaa
ggtgtatctaggattaaagaataccatatgaaagagttatcggatggagttcgtacattt
gatgattttttacgggatggtttaatcgagtatcttgatgtgaatgaggagaataatgct
ttgattgctttatatgaaggagaagctacacctgaaacaacccatatcgagatagagccc
tttaccattttaggtgttgtagctgggctaattccatatcctcatcataaccagtcacct
agaaacacgtatcagtgcgctatgggaaagcaagccatgggaaatattgcatacaatcag
ttaagacggatggacacattactttacttgctggtgtatccccagagacccttgttaaca
accaggacaattgagctggttggatatgacaagcttggagcaggccagaatgcaactgtt
gccgtcatgagttacagtggctatgatatagaggatgcgatcgtcatgaataaatcgtca
cttgatcgtggttttggtcgttgtattgtttttaagaaatattcttctgtcaaccagaag
tatgaaaacaacactgctgacaggatagtaaggccgaatagaaatgaagattttacagga
aatatgcagatattagatgatgatggacttgctgcaccgggagagataattagaccaaat
gacgtttatgtcaacaaacaatcccccatcatcacgaaagggtcgcccttaccaggaata
ccagatagtgcatataggccttgcagacaaatatttaaaggttctgaaggagagccgacg
gtggttgatagagtggctctttctacagataagaatgactgtttatgtatcaaattcttg
attcgccagacccgtagaccagagcttggtgataagttcagtagcagacatggacaaaaa
ggtgtatgcggcacaattgtccagcaagaagatttcccattttcagaacgtggaatttgt
ccggatctaattatgaatcctcatggattcccgagtcgaatgacagtggggaagatgatt
gaacttttaggcggaaaagctggggtttcatgtggtaggtttcactatggtagtgcattt
ggagagccaagtggtcatgcagataaagttgatgctataagcgagactcttatcaagaga
ggcttcagttacaacgggaaggactttctttactcaggtatcacaggttgcccattacaa
gcatatatatttatgggaccaatttactaccaaaagttaaaacacatggtcttggacaaa
atgcatgctcgaggtagtggtccgcgagtcatgttaactagacaaccaacagaagggaga
gctaggaatggaggactgcgagtaggagaaatggaacgtgattgtttgattgcttatggt
gctagcatgctgatttacgaacgcttaatgatctcaagcgatccttttgaagttcaggtc
tgcagagtttgtggcttgctgggatactacaaccacaagctaaaaacgggaatttgttcc
tcgtgtaaaaatggagataatatctccactatgaagcttccatatgcgtgcaagctctta
atccaggaactccaatctatgaacatcgttcctcgcctaaaactagcagaagcatga
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integrated database retrieval system
