KEGG   Benincasa hispida (wax gourd): 120090381
Entry
120090381         CDS       T07258                                 
Name
(RefSeq) DNA repair protein UVH3 isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
bhj  Benincasa hispida (wax gourd)
Pathway
bhj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bhj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    120090381
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bhj03400]
    120090381
DNA repair and recombination proteins [BR:bhj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     120090381
SSDB
Motif
Pfam: XPG_I XPG_N XPG_I_2 UBM
Other DBs
NCBI-GeneID: 120090381
NCBI-ProteinID: XP_038903931
LinkDB
Position
11:48203325..48213803
AA seq 1597 aa
MGVHGLWELLAPVGRRVSVETLAGKKLAIGTNLSLRTSLNYLKNFMSMRFSLWVCLSIED
ASIWMVQFIKAMRDDRGEMVRNAHLLGFFRRICKLLFLRTKPVFVFDGATPALKRRTLIA
RRRQRENAQAKVRKTAEKLLLNHIKVMRLKELAEDIQNQKQQRKQKLSKKSTLPSRDKNF
NGTSTSESCEGIPNRGSLENLDEMLAASIMAEENGLFLSSASSFSGATLAKEGGGEGSIL
NQKYNNESKGKEILSDETYIVGSDSERMEVASRSVHQQNLDEMLAASIAAEEARSLNENA
SVSAVTNLDGEDTDDEDEEMILPEMHGVVDPSVLAALPPSVQLDLLVQMRERLMAENRQK
YQRVKKDPAKFSELQIQAYLKTVAFRRDIDQVQKAAAGRGVGGVQTSRIASEANREFIFS
SSFTGDKQVLASTIVEKNGDKDLQAPTVQQPLSSLKNTEIPSTSNPLAQSTPDKSGGFED
NIETFLDERGRVRVSRVKAMGMHMTRDLERNLDLMKEIEKNTSANKAANPEPIQNIEICN
PENFSFQSQVLDTSDEGVGGSINKLNERGGEPMLNEETAIEILLEDEGGKSFDGDDDLFT
NLAAENPIGMASFDISTQKLSLDGTTDSGWEDAVEGKTYSPKNVEVDDHSFKEGTVSDES
DVDWEDGACDHVNPVPFEADLAQSVSKGFLEEEADLQEAIRRSLEDRGYTKSGTVSSELQ
QPQPVIVGKRAEQCTSVQNESMIGLDKLDSADGMNCLNFNDSTRTEGMTESSSQEKQCSE
PVMSLDTKTHTIAEQLDASYNVAKFSPKESNENNDTLEPLSRDTFGAVQVGDRINNTVID
PPCRMVEMEGIYPPGNGSSRKPFACENNFKQNLPVDEHSNDLSLDIKDAKILSVEETSNA
EIEVTDDELKNRFSVLEQERLNLGDEQKRLERNAESVNSEMFAECQELLQMFGLPYIIAP
MEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDVENELGLN
QDKLIRMALLLGSDYTEGISGIGIVNAVEVMNAFPEEDGLHKFKEWIESPDPSILGTLGA
KTGLTARRRGSKASENDMTCSNTGGSASEENISKDLEENIAVKQSFMDKHRNVSKNWHIP
SEFPSEAVISAYICPQVDKSAEPFSWGKPDHFVLRRLCWEKFGWENSKADELLLPVLKEY
SKHETQLRLEAFYTFNERFAKIRSKRIKKAVKSITGSRSAVLMDDAVRDVSVNNQRELSV
EPKENMSEKCSSERQDACSNEDDRHRKPSRKRQLDGEQAQPGKDRKLTKKEKGKPSRNEG
SHSERGRGRGRGKGRGRGRLVSKGKAPITELIETSSSDDESEFDNQKFDLENFQEPQEKR
RSSRIRKSASYTIDNADQQSDHTGDEFSNDKAEEDRVIQGQYAHPETVMSQSENMESGSG
SPKRSPQNDYLKTGGGFCLVEDEMSRQEMCQNKDPALEANNSEDYLTMGGGFCLDDDDER
IDPVAHPNQATVLEVPKDGFENDPGQSTVSPEKHVGVEDTDARVESVLDVGNPNPVNNSN
SSQVGEDVQEEPKDHSVRRAFGGALSAMPNLKRKRKY
NT seq 4794 nt   +upstreamnt  +downstreamnt
atgggagttcacggtctttgggagcttttggcccccgtcggccgccgtgtctccgtcgaa
acccttgccgggaaaaagctcgccatcggtacaaatctctctctacgtacatctttaaat
tatttaaaaaatttcatgtcgatgaggttttctctttgggtatgtctttctattgaagat
gcgagcatttggatggtacaattcataaaggctatgcgcgatgataggggagaaatggtc
cgaaacgcccatttactcggttttttccgacggatttgtaaacttttgttcttgcggacc
aagcctgtctttgtcttcgatggtgcaaccccggctctcaagcgccggactcttattgct
cgccgtaggcagcgtgagaacgcccaggctaaagttcgtaagaccgccgagaaattgctt
ctgaatcatatcaaggtaatgaggttaaaagaacttgctgaggatatacagaatcagaaa
cagcagaggaagcaaaagctatcaaaaaagagtaccttgccaagccgtgacaaaaatttc
aatggtacttctacttccgaaagctgtgaaggcatcccaaataggggcagtcttgaaaat
ctagatgaaatgttggcagcatcaattatggccgaggagaatggacttttcttgagcagc
gcttcctctttttctggtgctactcttgctaaagaaggtggtggtgaagggtcaattctg
aaccagaagtacaacaatgaatcaaagggcaaggagattttgtcagatgaaacttacata
gtggggagtgattcagaaaggatggaagtggcctcaagaagtgtccatcagcaaaattta
gatgagatgttggcggcatccattgcagctgaagaagcaagaagtttgaatgaaaatgca
tcagtatctgctgttacaaatctggatggggaagatacagatgatgaagatgaagagatg
attttgcctgaaatgcacggggtggttgatccttctgtgttggctgctttgccaccttca
gttcaacttgatcttcttgttcagatgagagagagactaatggcagaaaacagacagaaa
tatcaaagggtcaagaaggaccctgcaaagttttctgagctacagatacaggcttatctt
aaaactgttgcttttcgacgagatattgatcaagtgcagaaggctgctgctgggagaggg
gttggtggtgtacaaacatcaagaattgcctcggaagcaaacagggaatttattttttca
tcatctttcacgggtgataaacaggtacttgcgtctactatagttgagaagaatggagac
aaagacctacaggcaccaacagttcagcaacctttaagttctctgaaaaatacagaaatt
cccagtacatccaatcctctggctcaatcaacccctgataagtcggggggttttgaggac
aacattgagacatttttggatgagaggggacgtgttcgagttagcagggtgaaggcaatg
gggatgcacatgactcgtgatttagaaaggaatttggatttgatgaaagagattgagaag
aataccagtgcaaataaggctgctaatcctgaacccatacaaaatattgaaatttgtaat
ccagaaaacttttcttttcaaagccaagttctagatacttcagatgaaggtgttggtgga
tctattaataagttgaatgagagaggtggagagcccatgctgaatgaagaaactgctata
gaaatattactggaagatgagggtgggaagtcttttgatggtgatgatgatctatttact
aatttagccgcagaaaatcctattggaatggcttcttttgacatctctacccaaaaacta
tctcttgatggtactacagattctggttgggaggacgcagttgaaggaaaaacttatagt
ccaaaaaatgttgaagtggatgatcactcgttcaaggaaggaaccgttagtgacgagagt
gatgtagattgggaggatggagcgtgtgatcatgtaaacccagttccttttgaagctgat
ttggcacagtcagtttctaaaggttttttggaggaagaggctgacttgcaggaggcaata
agaagaagtttggaggacagaggatatacaaaatctggcactgtatcttctgaacttcag
caaccacaaccagtgattgttggaaaaagggctgaacaatgtacgagtgtccaaaatgag
agtatgattggacttgataagctagatagtgctgatggaatgaattgtttgaatttcaat
gattctaccaggacagagggaatgacagagagttcatctcaagaaaagcaatgctcagaa
cctgttatgtcgttggataccaaaacccacacaattgccgaacagttggatgcttcttat
aatgttgctaaattttctcctaaagagtcaaatgaaaacaatgatactcttgagccctta
tctagagacacatttggtgcagttcaggttggggataggataaataatactgtgattgat
cctccttgtcgtatggttgagatggaaggtatttaccctcctggcaatggttcctcccga
aaaccttttgcctgtgaaaacaatttcaagcagaatcttcctgttgacgagcatagtaat
gatctttcgctggacatcaaggatgcaaaaatactttctgttgaagaaacaagcaatgca
gagattgaggttacagatgatgagttgaaaaatagattttcagttctggagcaagaacgt
ctgaatcttggagacgagcagaaaagacttgagcgtaatgctgaatctgtcaacagtgaa
atgtttgcagaatgtcaggaattactgcaaatgtttggcttaccatatattattgctcct
atggaagcggaagctcagtgtgcttatatggaacttgcaaatcttgttgatggagtggtg
actgatgactctgacgtcttcctgtttggggcaagaagtgtttacaagaatatatttgat
gaccgcaaatatgttgagacatattttatgaaggacgttgaaaatgagcttggtctgaac
caggacaagttaattcgcatggcactactacttggaagtgattatacagaaggcattagt
gggattggcattgttaatgccgttgaggttatgaatgcatttccggaggaagatggactc
cataaattcaaagagtggattgaatcaccagatccaagcatcttagggacgcttggtgca
aaaacggggttaactgcgcgtagaagagggtcaaaagcaagtgagaatgacatgacttgc
tcaaataccggtggttctgcatctgaagaaaacatttctaaagatctggaggaaaacata
gctgttaaacagagtttcatggataagcatagaaatgttagcaagaactggcacatacct
tctgaatttcctagtgaagcagtcatttctgcttacatctgcccacaagtggacaagtca
gcagaacctttctcctgggggaagccagaccattttgtccttcgcagattatgctgggaa
aagtttgggtgggaaaactccaaggcagatgaattgcttttgccagtcctgaaagagtac
agcaaacatgagactcaacttcggttggaggcattttacactttcaatgaacgatttgct
aaaatccgcagtaagagaataaagaaagctgttaaaagtattactgggagcaggtctgcc
gtgttgatggatgatgctgtgcgggatgtttctgtaaataatcaaagagaactttctgtt
gagcctaaggagaacatgtctgagaaatgttcatcagaaagacaagatgcttgttcgaat
gaagatgacagacaccgaaaaccttccagaaaaaggcagctagatggagagcaagctcaa
cctggtaaggatcgaaaactaacaaagaaggagaaaggaaagccaagtagaaatgaggga
tcacattctgagagaggtagaggtagaggtagagggaaagggagggggagaggtcggtta
gtatcgaaaggaaaggctcctattactgaactgattgaaaccagctccagtgatgatgaa
agtgaattcgacaatcagaaatttgatttggagaactttcaggagcctcaagaaaagaga
agatcatcacggatccgaaaatctgcaagttatacaattgacaatgcagatcaacaatca
gatcacactggggatgaattctccaatgataaagccgaagaagacagggtgatccaaggt
cagtacgctcatcctgaaactgtgatgagccaatctgaaaatatggaatccggttctgga
agtcctaagagatctccacagaacgactatctcaaaactggaggtgggttctgtctagta
gaagatgaaatgagccggcaagaaatgtgccagaacaaagatccagccttggaggctaac
aacagtgaagactacctcacaatgggaggcgggttttgcttagatgacgatgatgaacgc
attgacccggttgcacatcccaaccaagcgacagtattagaagtccccaaagatggtttt
gaaaatgatcctggtcaatcaaccgtctctcctgagaaacatgtaggtgtggaagataca
gatgcacgtgtagagtctgtgctcgatgtaggcaacccgaatcctgtaaataattcaaac
tcttctcaggtaggtgaggatgtgcaagaggaacctaaggatcattctgtaagaagggca
tttggaggagctttaagtgccatgccaaatttgaaaagaaagaggaagtactga

DBGET integrated database retrieval system