Benincasa hispida (wax gourd): 120090393
Help
Entry
120090393 CDS
T07258
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120090393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bhj03041
]
120090393
03009 Ribosome biogenesis [BR:
bhj03009
]
120090393
Enzymes [BR:
bhj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120090393
Spliceosome [BR:
bhj03041
]
Complex A
U1 snRNP components
U1 related factors
120090393
Complex B
120090393
Ribosome biogenesis [BR:
bhj03009
]
Eukaryotic type
Pre-60S particles
Helicases
120090393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
120090393
NCBI-ProteinID:
XP_038903955
LinkDB
All DBs
Position
1:complement(66864945..66872089)
Genome browser
AA seq
505 aa
AA seq
DB search
MSRYDSRSSDPTSYRDRRSDSGFGGSTGYSSSVRSSSSKNDYYASEGPKKVDLDGLPHFE
KNFYIEAPSVAAMTEREVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKAGFT
EPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPGDGPIVLVLAP
TRELAVQIQQEATKFGASSKIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESH
HTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQLARQFLY
NPYKVIIGSPDLKANHAIRQHVDIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI
TRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYD
FPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKELIAILEEAGQKVSPELAAMGRG
APPPPSGHGGFRDRGRGYGGGRSWS
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgctacgacagccgctcctccgatcccacttcttatcgcgaccgtagaagtgat
tcaggttttggtgggtctacaggctatagcagttctgttcgatcctcctctagcaagaat
gattattatgcatctgagggcccaaaaaaggtggatttggatggattgcctcattttgag
aagaacttctacattgaggctccatcagtggcggcaatgacagagagagaggttgaggag
tatcgtcaaaggagggaaattaccgtagaaggtcgtgatgttccaaaaccagtcaagtct
ttccgcgatgttggatttcctgattatgtcatgcaagaaattgccaaagctggcttcact
gagcctactcccattcagtcgcaaggatggccaatggcactcaaaggtcgagatctcatt
ggtattgctgaaacggggtcagggaagacacttgcataccttttgcctgcaattgtccat
gttaatgcccagccaattctttctcctggagatggtccgattgtgttagttctagctcct
actcgtgaacttgccgttcaaatacaacaagaagctacaaaatttggtgcatcatcgaag
attaagaacacatgcatatacggtggcgttcccaagggacctcaagtgcgtgatcttcag
aaaggagttgaaattgtgattgctacaccgggaaggttgattgatatgatggagtcacat
catacaaacttgcgaagggttacttaccttgtgctggatgaggctgatcggatgctagat
atgggatttgaccctcaaatacgaaaaattgtttcacagattcgaccagatagacaaacg
ttgtactggagtgctacctggcctaaagaagttgaacaattggccaggcagtttctttac
aatccatacaaggtcatcattggttctccagatctgaaagcgaatcatgccatacgccaa
catgttgatattgtctctgaaaatcagaaatataacaaattggtgaaattactagaggat
atcatggatgggagtcgaatcctgatctttatggataccaagaaaggatgtgatcaaatt
acccgacagcttcgcatggatggttggcctgcactttcaattcatggtgataagagtcaa
gcagaaagggattgggtcctctcagaatttcggtctggcaagagtcctataatgacggct
accgatgttgctgctcgtggtttagacgtgaaggacgtgaaatacgttataaattatgat
tttcctggatctcttgaggattatgttcaccgaattggtagaactggaagagctggagcg
aaaggaactgcatacactttctttaccgctgctaatgccagatttgcaaaagaacttata
gcgattcttgaagaggctggacagaaggttagtcctgaactggcagcaatgggtcgtggt
gcacctcctcctccctcaggtcatgggggatttcgagatcgtggaaggggatatggtgga
ggacgatcatggagttga
DBGET
integrated database retrieval system
