Benincasa hispida (wax gourd): 120090517
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Entry
120090517 CDS
T07258
Name
(RefSeq) uncharacterized protein LOC120090517 isoform X1
KO
K24155
rabconnectin-3a
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120090517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bhj04131
]
120090517
Membrane trafficking [BR:
bhj04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120090517
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
120090517
RAVE complex
120090517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_C
EIF3I
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT140_1st
WD40_Gbeta
DUF5544
Motif
Other DBs
NCBI-GeneID:
120090517
NCBI-ProteinID:
XP_038904163
LinkDB
All DBs
Position
1:complement(8970330..8993877)
Genome browser
AA seq
2490 aa
AA seq
DB search
MAGTASKMDPISRLPLPLLGSEPIPSAPNRFDPPGSSIDWIPDFAGYAWVAYGASSLLVI
SHFPSPLSPEETKIGPIFRQVLELSGDDLSAVNAVSWSPVFPSEGELAAAAGNRIGVFSH
DSGASRGSFCWRQNSVLVQSLKVEAIQWTGAGDGIIACGVEVVLWKNTNKSWEIAWKFKP
DVPQTLVSASWSTEGPLATAPHSRISKMESKLTEKACRSVLVIQSEGEYGYVRSELCHPL
PITAIQWRPSVNGPEIAKHTPRHVLLTCCLDGTVRLWSETENGKVRKFSKDVNNKKSMRR
HFSVAAVVEMNQALNGTLGMDLFVTWATEIKGMCEAFEVTKKVQSSVGFEQNRAGNCEWL
ISLGPGSLVTFWAVHCLDDVSPLRFPRVTLWKKQELKGCEVGRHYIEGCTNLSNKFLLKK
VVISRVHLSGSPSMCSLIQLLPCNSLVWSFLSAHTSADAGDASFDQKRLENLFSCSSTSQ
LNLSGHTGKILHVAVHPYNCEVKIAASLDSKGLLLFWSLSSISNCVVGPPTLTPTWELCG
KLVTQDSCSKYTSVRWAPSILDEELIFLMGHARGIDFFVVSISQSDEENTECHYLCTIPF
TGHGPFENGPTNIFSIPLPSYCNITYKFNKFMLLGVWIKGFQALSWEITLHAYDISGTGI
HCNCDIDNENKADLSTLTFESAFGSKKYCVSIIPCSSQLPNSQIHDQITSFAVVHQGTFV
PVQQKLASSGEPYTPAYIMATGSADGSLKLWRSNVGKPSIFHVPWELVCAVVTHQGPLAG
LCLTDCGRKIATISKDNHKPNTKNVHLWELAYLGAGTLLFEDELSFESNIVAVDWLALGN
GQFLLGICLQNELCVYSPKRFGGHTLSGITKSDIKTWICIGVARTLPSNCGFLWGPRTTA
IVLQDHYFRIVSPWLFLVDKNHDAMCNTRYIGETETQYVNGTDINISAAVFADECCSIKT
LSDDSYDSKCRSGLLGLISMPDVVDKLCGSLPSFHPQALLINIYSGKWKRAYSALSHLIE
HLSSAKKSSANSTFTIPEIPLSDYLEGVVKTSTDKGVQWSTNCLSSQFKESVSQWVFNWD
SMNNDNSFIPSSTKSEFSSFIEPLEQFYELAGLTSMEKTQTLAIVDLLGEISNKSSASVY
ESLDEPGRRYWVALRFQQLQFLRRDGRSASLEQLAIDSRLIGWAYHSDCQEILLDSVSSN
EPTWQEMQSLGVGIWFTNTTQLRIRMEKLARSQYLKKKDPKDCMLLYVTLNRIQVLAGLF
KISRDEKDKPLVGFLSRNFQEEKNKAAALKNAYVLMGRHQLELAVAFFLLGGDTSSAVSV
CAKNLGDEQLALVICHLVEGRGGPLQQHLITKFMLPSAIEKGDTWLASILEWELGNYSQS
FLNVLGLESNSLTGIPFLSSKHIALLDPSVGMYCLLLATKTSMKKAVGEQSTEVLCQLAT
LMMATALNRCGLPLEALEHMSTCGSINEVSDGINGVDIQSFETISKICQKSPRESSSWIS
IELAVHLEHRSKLDLAVQYFSKLIRKHPSWPTTNLESVECMACLKEYEMDYEKSLESFQH
KLNMGFAQFEMKFSLLPASLVSMMLVFLCNLGLQFIGHDIFHGFTSQECPDDKNLAVYSF
LLHSLLHKELLKAAQEISFSASRYAIACSLSFHRGEIRSKCLDTWWYYLQGLLLSLQGVR
AALRTTHGSLKNDLVSKILNILDLVEYNLYFASAWLLRDSKCLLIMLQPLLANAQSPHDV
DTEHLKQLLSQIGELIAQNLLTDVHYSHQIFEGMPDEESDDIVHSIPGDERWHIIGACLW
HHMSKFMKYKLATLTSKSEEGSFCGISRGNVVSWASSLTTFKSDQKDILKYLIELMSTGL
TSLLTIVLAEASSYQLKQLVSFLQYKLDQRLCVATVVWFEQFSQSSRHDKHHTDEMNKID
MCNKGEFETLWSITSNPNMISECFAHEKVHLLNCFDRKLSARWIDIYNATTRPEDSYTRE
GALISSFTSDTTGSPCKLLRNGRTLVRSEKELATLDDAMPFQKPKEIYRRNGELLEALCI
NSVDGRQAAIASNKKGIIFFRWEDGMPSRDEEDYIWSNSEWPLNLNGWAGSESTPAPTCV
FPGVGLGSSKGAHLGLGGATVGVGSSARPGRDLTGGGAFGISGYAGIGASGLGWETQEDF
EEFVDPPATAEHTSTRAFSSHPSRPLFLVGSTNTHVYLWEFGKDRATATYGVLPAANVPP
PYALASISSVQFDQCGHRFATAALDGTVCSWQLEVGGRSNVCPTESSLCFNGHASDVTYV
TSSGSIIAVAGYSSSAVNVVIWDTLAPPKTSQAAIMCHEGGARSISVFDNEIGSGSVSPL
IVTGGKGGDVGLHDFRYVVTGRTKKHSPKDERISDASNTNMLGTVGEQNLNGMLWYIPKA
HSGSVTKITSIPNTSLFLTGSKDGDVKLWDSKRAKLVHHWPKLHDRHTFLQPSSRGFGEV
VRAAVTDIQVIASGFLTCGGDGSVKLVQLQ
NT seq
7473 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaacagcctccaagatggatcctatctctcgtctccctctccctcttttagga
tccgagccgatcccttcagccccgaatagattcgacccccctggttcctccatcgattgg
attccagactttgccggctatgcgtgggtcgcttatggagcctcatctcttctggtgatc
tctcatttcccttctcctctatctcccgaagaaaccaaaatcggacccatatttcggcag
gtactggagctctccggcgacgacttatcggctgtcaatgccgtatcttggtctcccgta
tttccgtcggagggcgagcttgctgcagccgcgggcaaccggataggggtgttttctcat
gattcgggtgcttctcgaggttctttttgttggaggcagaattcagtgcttgtgcaatct
ctgaaggtcgaggccattcagtggacgggtgcaggagatggaattattgcttgtggagta
gaggttgttttgtggaaaaacactaacaaatcctgggaaatagcttggaagttcaaaccg
gatgtaccccaaactcttgtttccgcaagctggtctactgaggggccgcttgcaacggca
cctcattctaggatctcgaagatggagagcaagttaactgaaaaagcttgcagatctgtg
ctggtaattcagagtgaaggggaatatgggtatgtaagaagtgagttatgccatcctcta
cccataactgcaattcaatggaggccttcagttaatgggcctgaaatcgccaagcataca
ccaagacatgtgcttctgacatgctgcttggatggaactgtgagattgtggagtgagact
gaaaatggaaaggtcagaaaatttagtaaggatgtaaataataaaaagtcgatgagaagg
catttttctgttgctgctgttgtggagatgaatcaggcactgaatggaactcttggcatg
gatttgttcgtaacatgggcaaccgagattaaaggtatgtgcgaagcttttgaagtaact
aagaaagttcaatcctcagtaggattcgaacaaaacagggctggaaactgtgagtggcta
ataagtttgggtccaggatcattggttaccttttgggctgtccattgtcttgatgacgta
tccccgttaagattccctcgagtcacattatggaagaagcaagaactcaaaggatgtgaa
gtgggacgtcattacattgaaggttgtacaaacttgagtaacaagtttctcctcaagaaa
gttgtaatctcaagggttcatctgtctggttccccaagtatgtgttctttgattcagtta
ttgccgtgtaattccttggtgtggtcatttttatctgctcacacatcagctgacgcaggg
gatgcatcctttgaccaaaaaaggttagaaaatttattctcatgttcatctactagtcaa
ctgaatttaagtggtcacactggaaaaatcttacacgttgctgtccatccatacaactgt
gaggtcaaaatagctgcttccttggattctaaaggcttgcttcttttctggtcactatct
agtatctccaactgcgtcgtaggtcctccaacacttactccaacctgggaactttgtgga
aaacttgtaactcaagattcatgctccaaatatacaagtgtacggtgggcaccatcaata
ttggatgaagaactgatttttctcatgggacatgcaagaggaattgatttttttgttgtc
agtattagccaaagtgatgaagaaaatactgaatgtcactacttatgtaccatacctttc
actggtcatggtccttttgagaatggtccaactaatatattttccattccgttgccttct
tattgtaatataacatataaattcaataaatttatgttattgggggtatggataaaagga
tttcaggcattatcatgggaaatcaccctacatgcttatgatatatctgggactggaata
cattgcaattgtgatattgataatgaaaataaagctgatctcagcacgttgacatttgaa
agtgcttttggaagcaaaaaatattgtgttagtataatcccttgctcatcacagttaccc
aattctcaaatccatgatcagattacaagttttgctgtagtgcaccaaggaacttttgtt
cctgtgcaacaaaaattagcttcatcaggtgaaccatatacccctgcatatattatggct
actggctctgctgatggtagtttgaaactttggagaagtaatgtaggcaaaccatcaatc
ttccatgtgccatgggagcttgtctgtgccgttgtcacacatcaaggcccccttgctggt
ttgtgtctgactgattgtggtcgaaagattgcaacaattagcaaggacaaccataaacct
aataccaaaaatgttcatttatgggagcttgcataccttggtgcagggacccttttgttt
gaagatgaactgtcctttgaaagcaatattgttgcagtggactggctagctttaggaaat
ggtcagttcttacttggaatttgtttgcagaatgaattgtgtgtgtactccccgaagcgt
tttggcggtcacaccttgtcaggcatcacaaaatccgatatcaagacttggatctgcatt
ggggttgctcgtactcttccttctaactgtggctttctctgggggccaaggaccacagcg
atagttttacaagatcattactttcgtatagttagtccatggttgttccttgtggataaa
aaccatgatgctatgtgcaatactcgttacattggagaaactgaaactcaatatgtcaat
gggaccgatatcaacatttctgctgctgtttttgctgatgaatgttgcagtatcaaaaca
ctatcagatgatagttatgatagcaaatgtagatcaggattgcttggtctaataagtatg
ccggatgtagttgataaattgtgtgggtcactgccgtcttttcatcctcaggccctcctt
attaatatatattcaggcaagtggaaacgtgcatattcagctttgagtcatctcatcgag
catctttcgtctgctaaaaagagctctgcaaattcaacctttactattccagagatccct
ttgtcagattatcttgaaggagttgtgaaaacttctactgataaaggagttcagtggagt
acaaattgcttatcttcccagtttaaggaaagtgtttcacaatgggtcttcaattgggac
tctatgaataatgacaactcattcattccatcctccacgaagtctgaattcagcagcttt
attgagcctcttgagcagttctatgaattagcagggctaaccagcatggagaagacacaa
actctagcaattgtagatcttctaggtgaaatcagtaacaaatcttctgcatctgtttat
gaaagtcttgacgagcccgggcgaaggtattgggttgctctgaggtttcaacaattgcag
tttcttcgacgtgatggtagatcagcttctctggaacagctggccattgactcaagattg
attggatgggcctatcactcggactgtcaggaaattctattggattcagttagctccaac
gaaccaacttggcaggaaatgcaaagtttgggtgtcgggatttggtttactaatacaaca
cagttgcgaataaggatggagaaactggcgagatcccaatatctgaagaaaaaagatccc
aaggactgtatgcttctgtatgtcacactgaatagaatccaagttttagctggccttttt
aaaattagcagggatgagaaagataaacctttggtgggttttctttcacgcaattttcag
gaggagaaaaataaggcagcagctttgaagaatgcctatgttttaatggggagacatcaa
ctagaattggctgttgctttctttctgcttggtggtgatacttcttctgctgttagtgtc
tgtgcaaaaaatcttggggatgagcagcttgcactggtaatttgtcatctagttgaaggg
cgtggtggacctcttcagcaacacctaattacaaagtttatgcttccatccgccattgag
aagggtgacacttggcttgcaagtattcttgagtgggaattaggaaactactctcaatcc
ttcctgaatgtgcttggtttggagtcaaattccctaaccgggataccgtttctttcaagt
aaacatattgctttactagacccaagcgttggtatgtactgtctactgttagcaaccaaa
actagcatgaagaaagcagttggagagcaatctactgaggtcctttgccagctcgcaacc
ttgatgatggctactgctttgaacagatgtggtcttcctcttgaagctttggaacacatg
tcaacctgtgggagcattaatgaagtttctgatgggattaatggggttgatattcagagt
tttgagactataagcaaaatctgtcagaaatctcccagagaatcctccagttggatctct
attgaattagcagttcatctcgagcatcgatcaaaactagacttggcagtacaatacttc
tcaaaattgatacggaagcatcccagctggccaactacaaatttagaatctgttgaatgc
atggcttgcttgaaggaatatgagatggattatgagaaatctcttgaaagttttcagcat
aagttaaatatggggtttgcacagtttgaaatgaagttttctttgcttcctgcctctctt
gttagtatgatgttagtctttctgtgtaatcttgggctacaatttattggacatgatata
tttcatggatttacttcgcaagagtgcccagatgacaagaacctggcggtttatagtttc
ctcttgcatagtctcttgcacaaggaacttctgaaagcagcacaagaaatttcattttca
gcttcacggtatgctattgcttgcagtttatcttttcacagaggtgaaattaggtcgaag
tgtttagatacttggtggtactaccttcaaggtctcttactatcattacagggtgtaaga
gctgctttgagaactacacatggttctctcaaaaatgatcttgtttccaagatcctaaac
attcttgatttggttgaatataacttgtatttcgcatctgcttggctactgagagactca
aagtgtctccttataatgttgcagccactcttggctaatgcacaatctcctcatgatgtt
gacacggaacatctgaagcaactcctctctcagattggggagttgatagctcaaaattta
ctgactgatgtacattatagccatcaaatttttgaaggcatgcctgatgaagaaagtgat
gatattgtgcattcaattccaggagatgaaagatggcacataattggggcttgtttgtgg
catcacatgtccaaattcatgaaatataagctggctactttaactagtaaatctgaagag
ggtagtttctgtggtatctctcgtgggaacgttgtttcttgggcttcaagtcttacaacc
tttaaatctgatcagaaagacattttaaagtatctgattgaattgatgtcaacgggtctt
acttctctactgactatcgtccttgctgaggcttcttcttatcaactaaaacaactggtg
tcatttctgcaatataaattagatcagaggttgtgcgtggcaaccgttgtttggtttgaa
cagtttagccagtcatctaggcatgacaaacaccatactgatgaaatgaataaaatagat
atgtgtaacaaaggggaatttgaaacattatggagcattacttccaatcccaatatgata
tcagaatgctttgcacatgaaaaagttcatctgttgaattgttttgatcgtaaactctct
gcaagatggattgacatttataatgccaccacaaggccagaggacagttatactcgtgaa
ggtgcactgattagtagtttcaccagtgataccactggctcgccttgtaaattacttcgt
aatgggaggacacttgtcagatctgaaaaggaattggcaacccttgatgatgccatgcct
tttcagaaacctaaagagatatataggaggaatggagagcttttagaggcattgtgtatc
aactctgttgatggaagacaagctgcaattgccagtaataaaaagggtataattttcttt
agatgggaagatgggatgccctccagagatgaggaggattatatctggtcaaactctgag
tggcctctaaatctaaatgggtgggcgggctctgaatcgacaccagctccaacgtgtgta
tttcctggtgttggtcttggtagcagcaaaggggcacacctagggttgggtggtgctact
gtgggtgtaggttcatctgcaaggccagggagagatttgactggaggtggagcatttggt
atttccggttatgctggtattggtgcttctggcttaggttgggaaacacaagaggatttt
gaggaatttgtagatcctccagctactgcagaacacacgagcacgagggctttctccagt
catccttctaggcctcttttcttggttggttctaccaatacacatgtatacttgtgggag
ttcgggaaggacagggctactgcaacttatggtgtcttgcctgcagcaaatgtgcctcca
ccatacgctctggcctcaatatcatctgtgcagtttgaccaatgtggacatagatttgct
actgccgcattagatgggacggtatgctcatggcagttggaggttggaggaagaagcaat
gtctgtccaacagaatcgtctttatgctttaatggccatgcatcggatgtcacttatgtt
acttccagtggatcgataatagccgtggctggatatagctcctctgcagttaatgtagtc
atatgggatacactggctccaccaaaaacttcgcaagcagccattatgtgtcatgaaggt
ggtgctcgctctatttctgtgtttgataatgaaataggaagcggttctgtttctccactt
atagttactggtgggaaaggtggagacgtaggacttcatgacttccgatacgtagtcact
ggtaggactaagaaacactctcctaaagatgaaaggattagcgatgcttcaaatactaac
atgctaggtaccgttggtgaacaaaatttaaatggaatgctatggtacataccgaaggct
cactctgggagtgtcactaaaataacttccatcccaaatacgagtttgttcttgaccgga
agtaaagatggggatgtaaaactttgggattcaaaaagagctaagttagtgcatcattgg
ccaaagttgcatgataggcacacttttctgcaaccgagctcccgtggttttggtgaagta
gttcgggctgctgttactgatatacaagttatcgcaagtggatttcttacctgtggtgga
gatggctcggtaaagctggttcaacttcaatag
DBGET
integrated database retrieval system
