Benincasa hispida (wax gourd): 120091084
Help
Entry
120091084 CDS
T07258
Name
(RefSeq) probable polyribonucleotide nucleotidyltransferase 1, chloroplastic
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120091084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120091084
03016 Transfer RNA biogenesis [BR:
bhj03016
]
120091084
Enzymes [BR:
bhj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
120091084
Messenger RNA biogenesis [BR:
bhj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
120091084
Transfer RNA biogenesis [BR:
bhj03016
]
Prokaryotic type
tRNA degradation factors
120091084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
Motif
Other DBs
NCBI-GeneID:
120091084
NCBI-ProteinID:
XP_038904843
LinkDB
All DBs
Position
11:77487835..77527866
Genome browser
AA seq
923 aa
AA seq
DB search
MLANPCGLHFRPCYSHTSEFSNFGTSKFSLSSYCPRFHGSAKSKLSSLSLLRSKKNGKGL
VTRALSESAVPDSVAARDVALGSLRPYSVKIPVGDRHILVETGHIGRQASSAVTVTDGET
IVYTTVCLADTPSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRP
IRPTMLKGFYHETQILSWVLSYDGLHTPDCLAITAAGIAVALSEVPNSKAVAGVRIGLVG
DKFIVNPTTKEMEDSELDLVLAGTDSAILMIEGYCNFLPEEMLLQAVEIGQNAVTAICKE
VDSLVRERGKPKMLDAIKLPPPQLYEHVEEIAGNELEKVLQIRNKIPRRKALSSLEEKVI
TILTEEGYVSLDATSGGLEPIPDLVEDEDEDDEVVVDGEVDEGDVHIKPTIRKPIPTLFS
EVDVKLVFKEVTSKFLRRRIVEGGRRSDGRTPVEIRPINSKCGLLPRAHGSTLFTRGETQ
SLAVVTLGDRQMAQRVDNLVDVDELKRFYLQYSFPPSCVGEAGRIGAPSRREIGHGMLAE
RALEPSLPSEDDFPYTIRVESTITESNGSSSMASVCGGSLALQDAGVPIKCPIAGIAMGL
VLDTKEFGGDGTPLILSDITGSEDASGDMDFKLAGNEMGITAFQMDIKVGGITIPIMREA
LLQAKEGRKHILAEMLNSSPPPSKRLSPYAPLIHVMKVQPEKINLIIGTGGKKVKSIIEE
TGVEAIDTRDDGIVKITAKDLTSLEKSKAIISNLTMVPTIGDIYRNCEIKTIAAYGVFVE
IAPGREGLCHISELSSDWLAKAEDAFKVGDKIDVKLIEVNEKGQLRLSRRALLPDADQDS
SSKENTGNPSRNKTATQKGTDKGTPKKAGKENMEQTNVQKGGAAPIGNSLEDAAKLQKKF
IRKGVTATKERPMSKEQTKSTSS
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgttagcaaatccttgcggcctccatttccgaccatgctattcccacacatctgaattc
tctaattttgggacatccaaattctctttatcttcttattgccctcgcttccatggttcc
gcgaaatccaagttgtcttctctttcgcttcttcgcagtaagaaaaacggtaagggattg
gtcaccagggctctttcggagtctgcagtacccgactcggttgcggcgagggatgtggca
ctgggttctttgcggccttactctgtcaaaattcctgttggggatagacatattttggtt
gagacgggccatattgggagacaagctagcagtgctgttacagtaactgatggagaaact
attgtttatacaactgtttgtttggctgatacaccaagtgaaccttcagatttctttcct
ctttctgttaattatcaagaacgtttttctgcagcaggtcggactagtggaggattcttc
aaacgagaaggaagagcaagagatcatgaggttctcatttgtagattgattgataggccc
attcgtccaactatgctcaaaggtttttaccatgaaacgcagatattatcttgggttttg
agttatgatggtctgcacacccctgattgtttggcaattacagcagctggaatagcagtt
gcgctctcagaagttcctaattcaaaagcagttgctggagttcgaattggtcttgtcggc
gacaagtttattgttaatccaactaccaaagagatggaagattctgagcttgatttagta
cttgctggcacagatagtgcaatattgatgatagaggggtattgtaattttctaccagaa
gagatgttgctccaagctgtagaaattgggcagaatgctgtaacagcaatttgcaaagag
gtggattctttagttagagagcgtgggaaaccaaaaatgctcgatgccattaagcttcct
cctcctcagctgtatgaacatgttgaagaaattgctggaaatgagttagaaaaagttctg
caaattagaaacaaaattccccgacgaaaggctctctcatcattagaagaaaaagttatt
accatattgacagaagaaggttacgtcagtttagatgccacttcagggggtcttgaaccc
atacctgatttggtggaggatgaagatgaggatgatgaagtagtggtggatggtgaagtt
gatgaaggtgatgtccatattaaaccaactatacgcaagcctattccaacactcttttct
gaggtagacgtaaagttagtatttaaagaagtgacatccaagtttctccggagacggatt
gtagagggtggaagaagaagtgatgggaggacaccggttgagatacgtccaattaactca
aaatgtgggttacttcctcgggcacatggcagcacacttttcactcgtggtgaaactcag
tcacttgcagtggttacgctcggggataggcaaatggcacaaagagtggacaaccttgtt
gatgtagatgagttgaaaaggttctaccttcagtactcatttcccccatcgtgtgttgga
gaagctgggcgtattggtgcacctagtcgaagggaaattggtcacggtatgcttgcagag
agagcactggaaccatctttaccttctgaagatgattttccatacaccattcgtgttgag
agtacaatcaccgaaagcaatggctcctcaagcatggcatctgtttgtgggggttcattg
gctttgcaagatgctggagttccaattaagtgtccaattgctggtatagcaatggggttg
gttcttgatacaaaagaatttgggggagatggaactccacttattctgtctgacataaca
ggatctgaggatgcttccggagatatggattttaagttagctggtaacgaaatgggcata
acagcatttcagatggacataaaggtgggaggcattactatacccattatgagagaggcg
ctcctgcaagcaaaggaggggcgtaagcatattcttgctgaaatgttgaattcatctcct
cctccttcaaaaaggctttcaccatatgccccattgattcacgtcatgaaggttcaacct
gaaaaaataaatctaatcattggtactggtggaaaaaaggtgaagagcattatagaggaa
acaggagttgaggctattgacactcgagatgatgggatagttaaaattactgcaaaggat
ttgacaagcttggaaaaatctaaagctattattagcaatctgacaatggttccaactatt
ggtgatatttataggaactgtgagatcaagacgattgctgcttatggtgtatttgtcgag
atagcacctggacgagagggactttgccatattagtgagttgagctcagattggttggca
aaggcagaagatgcttttaaagttggagacaaaattgacgtcaaactcattgaggtaaat
gaaaagggccagctccgccttagccgtcgtgcattgcttccagatgctgatcaggattcc
agttcaaaggagaatacaggcaacccttctagaaacaagactgcaacacagaagggcact
gataaaggtacacctaagaaagctggtaaggagaacatggaacaaactaatgtacagaaa
ggaggtgctgcaccaataggtaattcattggaggatgctgcaaaacttcagaagaaattt
atacgaaaaggagtaactgcaacgaaagaaagacctatgagcaaagaacagacaaaaagc
acaagcagttga
DBGET
integrated database retrieval system
