Benincasa hispida (wax gourd): 120091776
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Entry
120091776 CDS
T07258
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 32
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bhj03009
]
120091776
Enzymes [BR:
bhj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120091776
Ribosome biogenesis [BR:
bhj03009
]
Eukaryotic type
90S particles
Helicases
120091776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
120091776
NCBI-ProteinID:
XP_038905824
LinkDB
All DBs
Position
11:14644159..14649451
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AA seq
732 aa
AA seq
DB search
MKKKFKSKKSAKQKRLSEIEEIKILNSWIESQKPDSGSNPMSLPPPPANCPVGRIDADTY
SRYAGATRFDQLPISNKTKDGLRKAEFVDMTDIQKASLPHALCGRDILGAAKTGSGKTLA
FLIPVLEKLYRERWGPEFGVGSIIISPTRELGAQLFDVLKAIGKFHNFSAGLLIGGRKDV
NTEKEHVNELNILVCTPGRLLQHMDETPNFDCSQLQVLVLDEADRILDVGFKKTLNAIVS
QLPKHRQTFLFSATQTKSVQDLARLSLKDPEYLSVHEESVTATPNSLQQTSMVVPLEQKL
DMLWSFIKAHLNSKILVFLSSCKQVKFVFETFKKLRPGIPLKCLHGRLKQDKRMGIYSEF
CEKRSVLFSTDVAARGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYHSGGRSVLFIMP
SEMKMLERLESAKVPIQLIKANTKRLQPVSGLLSALLVKYPNFQQLAQRAFITYLRSIHI
QKDKEIFDVMKLSIDEFSASLGLPMTPKIRFIDQKRRSQKMSANPTTFLALDSSGNENVF
NTSDGELECGDFKESDQRLLLPIDTPSSEVEDAAAPTRILKKKKLKINVHRPVGTRVSFD
EDGNPLAPLARLADIKSSNETFVVDKDKKDEFYKKRREELKQADKEDKLLNRNRLKEKKR
KEKMKKKAAKESQEEEDDVSGSEEDRPQKRSKKFVDSDSDIDNKVENNFNTESISVAEQE
ELALKLLSSLQP
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaaattcaaatccaagaagtctgccaagcagaagcgactatccgaaattgaa
gaaattaagatcttaaattcatggattgaatcacagaaacctgactcaggctccaatcct
atgtcgctccctccgccacccgcgaattgccccgttggccgcatcgacgccgatacctac
tctcgttacgccggagcgacgaggtttgatcagttgccgatttcgaacaagaccaaagat
gggttgcgcaaagctgagttcgtcgacatgactgacatacagaaggcttcactgcctcac
gcgctttgtggtcgagatattcttggtgcagctaaaactggttcaggaaagacgctagct
tttctcatacctgttcttgaaaaattgtatagagagagatggggtcctgagttcggagta
gggagtataataatatctcccacaagagaattaggagctcagctgtttgatgtactgaaa
gctattggaaaatttcataatttcagcgctggccttttaattggtggtcgtaaagatgtt
aacactgagaaggagcacgtgaatgagttgaatattcttgtttgcactcctggtcgactc
cttcagcatatggacgagactccaaattttgattgttcacagcttcaggttttagtcctt
gatgaagcggatcgtattcttgatgttggatttaagaagactttaaatgctatcgtctca
cagctacctaagcatagacaaacctttctgttctcagcaacgcaaacaaagtctgttcag
gatctggccagactcagtttgaaagatcccgagtaccttagtgtccatgaagaatctgtg
actgccacacccaatagtctacagcaaacttctatggttgttcctctcgagcagaagctg
gacatgctatggagctttataaaggcccatcttaattctaagattcttgtgtttctctct
agctgtaagcaggtgaaatttgtttttgaaactttcaaaaagttgcgccctggaatccca
ttgaagtgcctccatggaaggttgaagcaggacaaaaggatggggatatattctgagttc
tgtgagaagcgctcagttctcttctcaacagatgtagccgctagaggtcttgattttaat
aaggctgttgactgggttgtacaggttgattgcccagaagatgtggcgtcttacatacat
agagttggtcgcactgcccggtaccattcaggtgggagatcagttttatttattatgccc
tcggaaatgaaaatgcttgaacgattggaatcagctaaagtgcccattcagcttatcaag
gcaaacacaaaaagacttcaaccagtttctggtttgctgtcagccttgttagtcaagtac
cctaattttcagcaactcgctcaaagggcctttatcacatatcttcggtcaattcatatc
cagaaggataaggaaatatttgatgttatgaaactgtcaattgacgaattttcagcttcg
ttggggttgccaatgaccccaaaaattcgttttattgatcagaaaaggaggtcacagaag
atgtctgctaatcctaccacttttcttgcattggattcgtcgggtaacgagaatgttttc
aatacatccgatggagaattggagtgtggtgactttaaagaaagcgaccaaagacttctt
ctgcctattgataccccttctagtgaagttgaagatgctgcggcacctactcggattttg
aagaaaaagaagttaaagataaatgtccacaggccagtaggaacgagagtcagttttgac
gaggacggcaacccacttgcccctcttgctaggctagccgacatcaaaagtagcaatgag
acatttgtagtcgataaagataaaaaagatgagttttacaaaaagaggagggaagagtta
aaacaagctgacaaggaagacaaacttctcaatcgtaaccgtctcaaagagaagaaacga
aaggagaagatgaagaagaaggctgccaaagaaagtcaggaggaggaggacgacgtttct
gggtctgaagaagacagacctcagaaaagatccaagaaatttgttgacagtgatagtgat
attgacaataaagtagaaaacaacttcaatacagagtccatttcagtggcagaacaagag
gagttggctctcaaattattgagttctctgcaaccataa
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