Benincasa hispida (wax gourd): 120091789
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Entry
120091789 CDS
T07258
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bhj03000
]
120091789
03036 Chromosome and associated proteins [BR:
bhj03036
]
120091789
Transcription factors [BR:
bhj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
120091789
Chromosome and associated proteins [BR:
bhj03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
120091789
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_box_5
HMG_WDHD1
CDC45
DUF6209
Motif
Other DBs
NCBI-GeneID:
120091789
NCBI-ProteinID:
XP_038905836
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All DBs
Position
11:82234101..82241076
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AA seq
642 aa
AA seq
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MADGQLYNNISLGGRGGTNPGQLKTDPRGIQWKKQGGGKAVEVDKADIVGVTWMKVPRSN
QLGIRVKDGLYYKFIGFRDQDISSLTKFFQSNCGITPEEKQLCVSGRNWGEVDLNGNMLT
FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV
GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG
DELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
RNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDE
EDSDFVADKDDGGSPTDDSGGDDSDGSISGGEKEKPGKKEAKKDPSSSKAPAKKKSREGT
DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS
AEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESDSA
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggtcagctctacaacaatatctctctcggcggccgtggaggcactaaccct
ggtcagcttaaaacagatccaagaggtattcagtggaagaagcaaggaggtgggaaggca
gttgaggtggataaagcagacattgttggtgtaacatggatgaaggtcccaaggtcaaac
cagttgggaattcgggtcaaagatggcttgtattacaagttcattggattccgcgaccag
gacatcagcagtttaaccaaatttttccagagtaattgtggaataacaccagaggaaaag
cagctttgtgtcagtggtcgtaattggggtgaagttgatttgaatgggaatatgcttact
ttcttggttggttcaaagcaagcatttgaagtgtctctagctgatgttgcccaaacacaa
cttcaagggaagaacgatgttatgttggagttccatgtggatgatacaacaggagcaaat
gagaaagattctctaatggagataagttttcacataccaaataccaatactcaatttgtt
ggtgatgaaagtcgccctcctgctcaggttttccgtgacaaaattatgtccatggcggat
gttagtgcgggcattgaggaagccgtggtcacatttgagggtattgctatcctcactcca
aggggtcggtacagtgtagaactccacctttcattcctgcggctccaaggacaagccaat
gacttcaaaatacaatacagcagcgttgttcgccttttcttacttccaaagtccaatcag
ccacatacttttgtcgttgtgactttagatccaccaatccgtaaaggccaaactttatac
cctcacattgttctgcagtttgagactgactatgtggttcaaagcaccctgcaaataggt
gatgaacttctcaacacaaagtacaaggacaagttagaaccttcctataagggactgatt
catgaggttttcaccaccatattgcgtggtttatctggtgcgaaaattaccagacctgga
aaattccgcagctgtcaagatggttatgctgtcaagtcatctttgaaagctgaagatggt
gtcttatatccacttgaaaaaagtttcttctttcttcctaagcctcctacccttattctt
catgaggagattgactatgttgaatttgagaggcatgctgctggggggtcaaatatgcat
tactttgatcttctcattagactgaaaactgaacaagaacatctctttagaaatatccag
aggaacgaataccataatcttttcgactttatcagcgggaagggtttgaagatcatgaac
ttgggagatgctcaggctagagatggcgtggcagctgttctccaagaggatgatgacgac
gctgttgacccacatcttgagcgaattagaaatgaagctggtggagatgagagcgatgaa
gaggattccgattttgttgctgacaaggatgatgggggttctccaaccgatgattcgggt
ggggatgactctgatggtagcataagtggaggtgaaaaagagaagcctggaaaaaaggag
gccaaaaaagacccttcatcttccaaggcacctgccaagaagaaatctagagaagggact
gacgatggttcaaagaagaaaaaacagaaaaagaagaaggatccaaatgcaccaaagagg
gcaatatctggtttcatgttcttctctaagatggaaagagagaacataaagaaaagtaat
cctggaatttctttcacggaattagggcgagtacttggagacaagtggaataagatgtcg
gcggaagagaaagaaccatacgaatcaaaggctcgggatgacaaaaaacgatacaaggaa
gaaatcagtggctataagaatccacagccaatgaatatagattcagggaatgaatctgac
agtgcatag
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