Benincasa hispida (wax gourd): 120091955
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Entry
120091955 CDS
T07258
Name
(RefSeq) transcription factor bHLH140 isoform X1
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120091955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhj03400
]
120091955
Enzymes [BR:
bhj01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
120091955
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
120091955
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
120091955
DNA repair and recombination proteins [BR:
bhj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
120091955
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
120091955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
AAA_33
zf-C2HE
Macro
HIT
AAA_18
CPT
Zeta_toxin
ABC_tran
AAA
nSTAND3
AAA_22
POT1
AAA_17
Motif
Other DBs
NCBI-GeneID:
120091955
NCBI-ProteinID:
XP_038906052
LinkDB
All DBs
Position
11:50490974..50494644
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AA seq
747 aa
AA seq
DB search
MDMDTDENSTAKGKEGQGKLIMVILVGAPGSGKSTFCELVMGSSSRPWVRICQDTIGNGK
SGTKAQCLKSAASALNDGKNVFVDRCNLEIEQRADFVKLCGPRVDVQAVVLDLPAQLCIS
RSVKRTGHEGNLSGGKAAAVVNKMLQKKELPRLNEGFARITFCHNETDVQSAIDMYKSLD
LHDMLPRGCFGQKNPDKKVQLGIMKFLKKAEKPSETLSSANTVKDSPIPQTTQEKSDSCD
KKEESACTISRNVDIESDKGESPGVRSLEDNISQSDPPTLAFPSISTSDFKFSHEKAAEI
IVEKVEEFMDKLGNARLVLVDLSHGSKILSLVKAKAAKKNISSTKFFTFVGDITKLNSEG
GLRCNVIANAANWRLKPGGGGVNAAIFSAAGSGLEVATKQQANSLQPGNAVAVQLPSTSP
LFNREGVTHVIHVLGPNMNPQRPNYLNNDYDEGCKLLRNAYSSLFQAFISVVEDKFKSVK
GIHGRLGLTPSEPRKHSENSHHKFKRENLQNPERSKKWKGSQDSTEALNQNNNKTVPKMS
KHWGSWAQALYNTAMHPEQHSDTVLETSDDVVVLNDIYPKARKHLLVVARHEGLDQLADV
CGEHLPLLRTMHAVGLKWIDKFFHEDASLVFRLGYHSAPSMRQLHLHVISQDFDSSHLKN
RKHWNSFNTDFFRDSVAVMDEVSSHGKASMMDDESLMSMELRCNRCRSAHPNLPKLKAHI
FKCQAPFPSTLLEGGRLVIAPSNAPLS
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggacatggataccgacgaaaattcgacagccaaaggaaaggaagggcaagggaagctc
ataatggtaatattagtgggcgcacctggaagcggcaaatccaccttctgcgaacttgta
atgggttcctcttctcgcccttgggttcgaatctgccaggataccattggaaatggcaag
tctggaaccaaagcacagtgcttgaagagtgcagcgagtgcactgaatgatgggaagaat
gtatttgtggacaggtgcaatcttgaaatagagcagcgggcagattttgtgaagctctgt
ggcccacgagtggatgtacaagctgttgtattagatcttcctgcacagctctgtatctct
cgttctgttaagcggactggtcatgaagggaacttatcaggtggaaaagctgctgctgtt
gtgaataaaatgttacaaaagaaagaattgcccagactaaatgaaggattcgctcgcata
accttttgccacaatgagaccgacgttcaatccgctatagatatgtacaaatcgcttgat
ttacatgatatgcttccacgtggatgttttggccagaagaacccagacaagaaagtacaa
cttggcataatgaagttcttgaagaaagcagaaaaaccttctgagacactttctagtgct
aatactgttaaggattctccaattccacaaactacccaggaaaagagcgactcttgtgat
aaaaaggaagaatctgcctgcacaatatcgagaaatgttgatatagagtcagataaaggt
gaaagtccaggcgttagatccttagaagacaatatttctcagagtgatcctccaactctt
gcatttccatctatttcgacttcagatttcaagtttagccatgaaaaggctgctgaaatt
attgttgagaaggttgaggaattcatggataagcttggaaatgccagacttgtactggtg
gacttgagtcatggatcaaagatattgtctttggttaaagctaaagcagctaagaaaaat
attagttccaccaagttttttacattcgtaggtgatataactaaactcaattcagaaggt
ggattgcgctgcaatgttatagccaatgctgcaaactggcgactgaaaccaggaggaggt
ggtgtcaatgctgcaatttttagtgctgcaggttctggcctagaagtggcaactaaacaa
caagcaaactctcttcaacctggcaatgctgtggccgttcagttgccttcaacttctcct
ttgtttaatagggaaggagtaacccatgtcatacatgttcttggacctaacatgaaccca
caaaggccaaattatctcaacaatgactatgatgaaggttgcaagcttcttcgcaatgct
tactcttccttatttcaagcctttatttcagtagtagaagacaaatttaagtcagttaag
ggaattcacggacgccttggcttgaccccttcagaaccacgaaagcactctgagaatagc
catcacaagtttaagagagagaatttgcaaaatcctgaaagaagcaaaaaatggaaagga
tctcaggactcgactgaagcactaaaccaaaacaacaataagactgtccccaaaatgagt
aagcactggggttcatgggcacaagcactttacaacactgcaatgcatcccgagcaacac
agtgatactgtactggagacatcagatgatgttgtagtactgaatgatatttatccaaag
gcacgcaagcatcttctagtagtggctcggcatgagggactcgatcaactagccgatgta
tgtggagaacaccttccattgttgaggacaatgcacgctgtgggtttgaagtggattgat
aagttctttcatgaagatgcatcattagttttccgccttggataccactcggctccatca
atgaggcaactgcacctacatgttataagccaggatttcgattccagtcatctgaaaaac
aggaagcattggaattctttcaacaccgatttcttcagagactcggttgccgttatggac
gaagtcagtagccatggaaaggcgagcatgatggacgatgagagcttgatgtctatggag
ttacgttgcaacagatgcagaagtgctcatcccaacttacccaaattgaaagcgcatatt
ttcaaatgtcaagcgcctttcccttccacactacttgagggcggtcgtttagtgattgcg
ccaagtaatgctcctctgtcttag
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