Benincasa hispida (wax gourd): 120092000
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Entry
120092000 CDS
T07258
Name
(RefSeq) protein transport protein SEC16B homolog isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bhj04131
]
120092000
Membrane trafficking [BR:
bhj04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
120092000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
FimL_2nd
Motif
Other DBs
NCBI-GeneID:
120092000
NCBI-ProteinID:
XP_038906114
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All DBs
Position
11:3982955..3991909
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AA seq
1418 aa
AA seq
DB search
MAANPPPFQVEDQTDEDFFDKLVEDDFVGPDDSGSKFLDGSDSDDAKAFANLSINDAENT
FKDSGGGGDGGDHGHDEAVGEKGSVEADPGTLGAHAEEKASLVSLNSVEEISVLESGNDG
IGSESTSDSLVSKSDESGGPAIKEVGWSSFHADSSQNWGQGFGSYSDFFNDLGGNDAGSL
GVSLENNLNGEATIKTSADENYANNSVNYVQYQNNHQVYEGSTDQVSAGQDLSSSQQWEN
LYPGWKYDSASGQWYQVEDSAAAANVQGAFDTNLNGEWNDVSGTNTEVAYLQTSQSVVGT
VTETSTTDGVSNFNQVSQGNTGYPEHMYFDPQYPGWYYDTITQVWCSLESYNSSIKSTNE
AQHNQNGYVSANSYNYGNSSMYADYVQPNEYGSSGVHNQGLDDKLTGSYHNESQQNLTSW
QTESVSSQAGPTFGGNQLLDRSSSPDFSVRKEQQKSVSSYGAVPSYFQPSQVHNEVNGPT
SLNSFPSTMDYGHQFHQENPKEHEHMPMSSDYYSNQNVTNIQKSFHGGHQSSYASNAGRS
SAGRPPHALVTFGFGGKLVVVKDSSSFGNSTFGSQAPVGGTISVLNLMEVVMGNTNSNAI
GNDVGACDYFSALCQHSFPGPLVGGNVGNKELQKWIDERIANCESSGMDYRKGEALRLLL
NLLKIGYQHYGKLRSPFGTDTVLRVITPPLEYKESDNPESAVAGLFASAKKNGVHFNNYH
ALSHCLQVLPSEGHMRATASEVQSHLVSGRKKEALQCAQEGQLWGPALVLASQLGDQFYI
DTVKQMALKQLVPGSPLRTLCLLIAGQPAEVFSTQSMSNINPLGGSMAQNSSQFPANSML
DDWEENLAVITANRTKDDELVIIHLGDSLWKERSEITAAHICYLVAEANFESYSDSARLC
LIGADHWKFPRTYAGPEAIQRTELYEYSKVLGNSQFILLPFQPYKLIYAYMLAEVGKVSD
SLKYCQAVLKSLKTGRAPEVETWKQLLFSLEERIRAYQQGGYTTNLAPGKLVGKLLNFFD
STAHRVVGGLPPPAPLTTHGNIHGNEHYHEPVVPRVSTSQSTMAMSSLIPSASMEPISEW
TADSSKMTVSNRSVSEPDFGRTPRQNQISSSKESMSADGQGKTSDSRTSRFTRFGFGSQL
LQKTVGLVLRPRPGRQAKLGEKNKFYYDEKLKRWVEEGAETPAEEPALPPPPTTATFQNG
GTDYNLRSALKKEAPSHDGSVEFASPNPTPAENSSGIPPIPPSSNQFSARGRMGVRSRYV
DTFNQGNGSSANLFQSPSVPSIKPRVAANAKFFVPSPALSPEPTEETIPESTEEDTTTTS
EHPSTSTTNDPFSTPSTTTLMQRFPSMGNISVKSANKSSHGPFAEANSRRTASWSGANFS
DAFSPLHKPTGLKPLGEALGRTPINGGGMGDDLHEVEL
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaatcctcctccatttcaggtggaggatcagacagatgaagatttcttcgat
aaattggttgaagatgattttgtgggacccgatgattcaggatccaagttccttgatgga
agtgattctgatgatgccaaggcgtttgccaatctgagtattaatgatgcggagaataca
ttcaaggattctggtggtggtggtgatggtggtgaccatgggcatgatgaagccgtaggg
gagaagggttccgtggaggctgatccagggacattgggagcacatgcagaagagaaggct
tctttggtttctttgaattctgtcgaggaaattagcgtattggaatcgggcaatgatggt
attggatcagaatcgacctcagattcgttggtgagcaagagcgatgaatctggtggtccg
gccataaaggaggtaggatggagttcgtttcatgctgattcatcgcaaaattgggggcag
gggtttggatcatattcggattttttcaatgatttgggtggtaatgacgcagggagtctc
ggtgtgtccttggagaataatttgaatggtgaagcaaccattaaaactagtgctgacgag
aactatgcaaataactctgttaattatgtgcagtatcaaaacaatcatcaagtttatgaa
ggatccacagatcaagtttcggctgggcaggatttaagtagcagtcagcagtgggaaaat
ctctatccagggtggaagtacgattcagcttctggacaatggtaccaggtagaggactct
gctgcagcggcaaatgtccaaggtgcctttgatactaatttgaacggtgaatggaatgat
gtttctggtacgaacacggaggttgcatatttacaaacttctcagtctgtcgtaggcact
gtaactgagactagcacgacagatggtgtttctaactttaatcaggtatcacaaggaaat
actgggtaccctgaacatatgtactttgatccacaataccctggttggtattatgataca
attactcaagtatggtgctccttggaatcctataattcatcaattaaatcaactaatgaa
gctcagcataatcaaaacgggtatgtatcagctaatagctataattatggtaacagtagt
atgtatgctgattatgtgcaacctaacgaatacggatcgagtggtgtgcataatcaaggc
ctagatgataaattgacagggtcttaccataatgaaagtcaacaaaatttgactagttgg
caaacagaaagtgtttcatctcaggctgggccaacttttggtggaaatcagctactggat
aggtcttcaagtcctgatttttctgtaagaaaagagcagcagaagtctgttagttcttat
ggagcagttccatcatatttccaaccaagtcaggttcacaatgaggtcaatggacctacc
agcttaaatagctttccctcaactatggattatggtcatcagtttcatcaggagaatcca
aaggaacatgaacatatgcctatgtcgagtgactattatagcaatcagaatgtgactaat
attcaaaaatcttttcacggaggtcatcagtcttcttatgcttcaaatgctggaagatct
tctgctggacgtcctccacatgcactggtaacatttggatttggaggtaaacttgtagtg
gtgaaagatagcagctcctttggcaactcaacgtttggaagtcaggctcctgttggaggc
acaatttctgtcctgaacttaatggaagttgtcatgggtaacactaattccaatgctatt
ggcaatgatgttggtgcatgtgattactttagtgctctctgccaacattcctttcctggt
ccactggttggtggaaatgtggggaataaagagttacagaaatggatagatgaaaggatt
gcaaattgtgaatcatcaggaatggattacagaaaaggtgaagcgttgaggctgcttctt
aatttgctcaagataggatatcagcattatgggaaacttcgatcaccatttggcacagac
accgtgttaagggtaattactccccccttagaatataaggaaagtgataatccagaatca
gcagttgccggtctttttgcttctgccaagaagaatggcgtacatttcaataattatcat
gctcttagccactgcttgcaagtattgccttctgaaggacatatgcgggcaactgcttct
gaggttcagagtcacctagtatctggtagaaagaaagaggctttacaatgtgcacaagaa
ggtcagttatggggacctgcccttgttcttgcttcacagctcggtgaccagttttacatt
gatactgtgaagcaaatggctcttaagcagttggtacctggatcacctctgcggaccctt
tgcctgcttatagctgggcaacctgcagaagtcttttctacacaatcaatgtctaacatc
aatcctctgggtggtagcatggctcaaaattcttcacagtttcctgcaaatagtatgctg
gatgattgggaagaaaatttagcagtgatcactgccaacaggacaaaagatgatgaactt
gtaattattcatcttggagactccttatggaaggaaaggagtgagataactgctgcccac
atttgctatttagttgccgaggcaaactttgagtcatattcagacagtgctagactctgt
cttattggagctgatcactggaaattccctcgaacctatgctggcccagaggctatccag
agaactgaattatatgaatactccaaagttcttggaaactctcagtttatccttctaccc
tttcagccatataagctcatatatgcttacatgttagcagaagtggggaaggtttcagac
tcgttgaagtattgccaagcagttttgaagtcacttaaaactggtcgtgctcctgaagtt
gaaacgtggaagcagttgctattttctctcgaagagaggattagagcctaccaacagggt
ggatataccacaaatttggcccctggaaaattagtcggaaaattactcaacttttttgac
agtactgcacatcgtgtagttgggggcttaccacctcctgcaccattaaccacacatgga
aatatccatggtaatgaacattatcatgagccagtggtcccaagagtatcaactagtcag
tcaacaatggcaatgtcatcgttaattccatctgcttcaatggagcccataagtgagtgg
actgctgatagcagtaagatgacagtttcaaacaggagtgtttcagagccagattttgga
agaactccaagacagaatcagatcagttcttcaaaggaatcaatgtcagctgatggtcaa
ggaaaaacatcagattcaagaacatctcgttttacacgttttggttttggttcacaattg
ttgcagaagactgttggactagtcttgaggcctcgcccgggtcggcaggcgaaattgggt
gagaagaacaaattttattatgatgaaaagctgaagagatgggttgaggaaggtgctgaa
actccggcggaagagccagccttacctccacctcctacaactgcaacgttccagaatggt
ggaactgattacaacttgagatctgcactaaagaaagaagcaccatcccatgatggaagt
gtggagtttgcaagtcccaatcctactcctgcagaaaatagttccggaatcccacctatc
ccaccaagctcaaaccaattctcggctcgtggacggatgggtgttcgttcaaggtatgtt
gacaccttcaaccaaggcaatgggagctcagcaaacttgtttcagtcaccttctgttcca
tcaattaagccaagggttgctgccaatgcgaaattctttgttccaagtcccgcattgtca
cctgaaccgacagaggaaactataccggaatccactgaggaagacaccaccacaaccagt
gaacatccttcaacatccaccacaaacgatccattttctactccctcgacaactacgctt
atgcaaaggttccctagcatgggaaacatctcagtaaagagtgcaaataaaagtagtcat
gggccgttcgcagaagccaactcccgacgaactgcatcgtggagtggtgcaaatttcagt
gatgcctttagcccccttcataaaccaacaggacttaaacctctaggcgaagcattgggt
cgcacaccgattaatggcggtggcatgggagatgacctccatgaagtggaactttaa
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integrated database retrieval system
