Benincasa hispida (wax gourd): 120092156
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Entry
120092156 CDS
T07258
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03440
Homologous recombination
bhj03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120092156
03460 Fanconi anemia pathway
120092156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bhj04121
]
120092156
03036 Chromosome and associated proteins [BR:
bhj03036
]
120092156
03400 DNA repair and recombination proteins [BR:
bhj03400
]
120092156
Ubiquitin system [BR:
bhj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
120092156
Chromosome and associated proteins [BR:
bhj03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
120092156
DNA repair and recombination proteins [BR:
bhj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
120092156
FA (Fanconi anemia) pathway
Downstream FA components
120092156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
120092156
NCBI-ProteinID:
XP_038906309
LinkDB
All DBs
Position
11:50140377..50147508
Genome browser
AA seq
1107 aa
AA seq
DB search
MSSWQISSDAGNNFRWELSAERLEVKSLCEQNDSLSRSNSTSVARLPSMADLLLCSRFMQ
NPEDAGAGAPMFRTGLGKSVSVKQSSIDKALSLLADDNAPDIGQLHSAGNFTNSLFQTGS
GKSVNVSSEGLLRAKTLLGLEEGDTCSNFQSFGQAISPYDVEGGFLGSKGVCGMENMSGA
SVSISPLVSNTCFSRSSLENHASPSFRQIELPNQAPKPPPIKFHTAGGRSLSVSSDALER
ARSLLGDPELGSFLDEGDMNCYKRNTGDATPSIGKHVFHTPSFSKEESTTKHTSKSFVFP
LQSSSRVMQSSFKSKSILGSNLMKKFDAAEEESISRFDNSKTCLPETLGSQPREPSTIVE
NASENRIRSGIHLGERSFGGPLNDISNIVDSRSRSDRASNNEKRKLWGTSSISPFKRPRN
SKFSTPLNKNASLVTTSLSTSSSNNFSCKRRVSTWYPHQTSRVYIKEYFGKPPSNYDKLD
YLSDEVRKIKAENAEKYKVPDNSGTHCIGVEAFRHMLADSGASLQHASELWVTNHYKWIV
WKLACYERQSPVKSNRKFLAVSNVLEELKYRYEREVNQGHRSAIKRILEGDAPPSMLLVL
CISAIHSNCKSRAQVYSSMINELEHGEGAKVELTDGWYSIDALLDGPLSKQLLMGKLFVG
QKLRIWGARLCGWIGPVSPLEMSETVYLTLHINGTYRAHWADRLGFCKNAGVPLSFKCIK
SSGGPVPWTLVGVSRKYPVLYKERLGDGASIVRTERMEMKIGQLYDQRRTAIVDGIVSEF
QRGTKSSIYNESDSEEGAKLFKILETAAEPELLMAEMSPEQLTSFASYQAKIEAIRQSDM
EKSIEKALADAGLSGRDVTPFMRVRVVGLTSKSNQRKTHRKEGLITIWNPSEKQQLELVE
GQAYAVGGLVPINCDADILYLQTKGSTTKWQSLSPQSMKCFEPFYNPRKSVLLSNLGEVP
LSSEFDLVAIVVHVGEVFTTAQQKKQWIFVADGSLSESHSEGISNSLLAISFCSPYADDE
SFVPMNCNLIGSTAGFCNLIKRPKDQINHLWVAEATENTSYFLNFDSTDCSHMKNAGVSA
KRWAENSNSIIKNLRRKILFMIDDRKG
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtggcagatttcttctgatgccggcaacaatttccggtgggaactttccgct
gagcgtctcgaagtcaaatccttatgcgaacaaaatgattctctttctcggagtaacagc
acctccgtcgcccgtctcccatccatggctgacctcttgctttgctctaggttcatgcaa
aatcccgaggatgcgggtgccggcgctccgatgttccgaaccggattgggaaaatcggtt
tctgttaaacagtcttcaatcgataaggctttatctctgcttgccgacgataacgctcca
gatataggtcaattgcatagtgcaggtaatttcaccaattctctctttcaaacaggctct
gggaaatcggtcaacgtatcttctgaaggtcttcttagagccaagacattgttgggactg
gaagaaggtgatacttgttccaattttcaaagcttcggacaagctatcagtccatacgat
gtggaagggggatttttgggatcaaaaggtgtgtgtggtatggagaacatgagcggtgca
tcagtttccatctctcccttggtctctaatacttgcttttcaagaagttcattagagaat
catgctagcccgtcatttagacaaattgaattgcctaatcaggctcccaagcctcctcca
ataaagtttcatacagccgggggaagatccttatctgtttcaagtgatgcactagaacgt
gcaagaagcctccttggtgacccagagttgggaagtttcttggatgaaggggacatgaat
tgctataagaggaatacgggagatgcaacaccgtcgattgggaaacatgtttttcacact
ccttccttcagcaaggaagagtcaactactaaacacacatccaaaagctttgttttccca
ctacaatcatcttcaagagttatgcaatcttcattcaagtcaaaaagtatattaggtagt
aatttgatgaagaaatttgatgcagctgaagaagaaagtatcagtaggtttgacaacagt
aaaacctgtttgccagaaactttaggcagccagcctagagagccgagtactatagtagag
aatgcttctgaaaatagaattagatcagggattcatttaggtgagcggtcatttggtggg
ccgctaaatgatatatcaaatattgttgactcaagaagtagaagtgatagagctagtaat
aacgagaagaggaagctttggggtacaagttctatatctccattcaaaaggccccggaat
tccaagttctccactcccttgaataaaaatgcatcacttgttaccacaagtttatctact
tcgtcgtctaataacttcagttgcaaaagaagggtttccacttggtatccacatcaaact
tcaagggtgtatatcaaggagtattttggaaaacctccatcaaactatgacaagttggat
tacttgtcagatgaagtcagaaagatcaaagcagaaaatgcagagaaatataaagttcct
gacaactctggcacacattgtattggagtagaagcttttcgtcatatgttagctgactct
ggagcttctctgcaacatgcttctgaattgtgggtcacaaatcactacaagtggattgtt
tggaaactggcctgttatgagaggcaaagccccgtcaaatcaaatagaaaatttttggca
gtttccaatgttctcgaggaattaaaatataggtatgaaagagaagtcaatcaaggccac
cgttctgcaataaagagaatattagaaggagatgcaccaccatcaatgttgttagtttta
tgtatttcagctattcactcaaattgcaaatcaagggcccaagtttattcatccatgatc
aacgagcttgaacatggtgaaggggcaaaagttgaactgactgatggatggtattccatt
gatgctcttttggatgggccgctgtcaaagcaacttcttatgggaaaactgtttgtggga
cagaaactccggatatggggagcaagattgtgtggttggatcgggcctgtttcacctctt
gagatgtcagagactgtttatttgacgttgcatataaatggaacttatagagctcattgg
gcggatagactgggattctgcaaaaatgccggtgtcccattatcctttaagtgcatcaag
agcagtgggggtccagttccttggaccttggttggagtctcacggaaataccctgttctt
tataaggagaggttaggtgatggggcatccatagtaagaactgagaggatggagatgaag
atcgggcaattatatgaccagaggcgcacagctatcgtagatggtattgtttctgaattc
cagagagggacaaagagtagtatctacaatgagagcgatagtgaagaaggggcaaagctc
tttaagatcctcgagacagcagccgaacctgaacttttgatggcagagatgagtcctgaa
cagttgacttcttttgcgagctaccaagctaaaatagaggcaatcaggcaatcagacatg
gaaaaatcaatcgagaaagcattggcagatgctgggttaagtgggagagatgtcactcca
tttatgagagtgagagtggttggacttacaagcaaaagcaaccaaagaaaaacccatagg
aaggagggcttgattacaatctggaatccatcagagaagcagcaactcgagctggtcgag
ggccaggcatatgctgttggaggacttgtgccaataaattgcgatgcggacattctttac
ttgcaaacaaaaggatcaaccaccaaatggcagtctttatctccccagtccatgaaatgc
tttgagcccttttataacccccggaaatccgttttgttatcaaatttgggggaagttcct
ctatccagtgaatttgatctggtagcaattgttgtacatgtgggagaagtttttactact
gctcaacagaagaaacagtggatatttgtggcagatggttctctatctgagtcacattca
gaaggcatatctaattcactgcttgctattagtttctgctcaccgtatgcggatgatgag
tcatttgtgccaatgaactgcaacctcatcggttccactgcaggtttctgcaatcttata
aagagaccaaaggaccaaataaatcatctctgggtagcagaagcaacggaaaatacgtca
tactttttgaattttgattctacggattgttctcacatgaaaaatgctggagtttctgct
aaaagatgggcagagaattctaactcaattattaagaatctcaggaggaagattttattt
atgattgatgatcgtaaaggctag
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