Benincasa hispida (wax gourd): 120092213
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Entry
120092213 CDS
T07258
Name
(RefSeq) pre-mRNA-splicing factor SLU7
KO
K12819
pre-mRNA-processing factor SLU7
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120092213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bhj03041
]
120092213
Spliceosome [BR:
bhj03041
]
Complex C
Other components
Step II factors
120092213
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
120092213
NCBI-ProteinID:
XP_038906382
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Position
1:complement(13529554..13535594)
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AA seq
536 aa
AA seq
DB search
MATASVAFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAERP
SLKHQRKWKSDPNYTKSWYDRGAKIHQADKYRKGACENCGAMTHNAKACMERPRKVGAKW
TNMHIAPDEKIETFELDYDGKRDRWNGYDPATYARVIERYEARDEARRKFLKEQQLKKLE
EKNNKQNEDAEVSDEDEDEDDLKVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLRI
REDTAKYLLNLDVNSAYYDPKTRSMREDPLPDADPNEKFYGGDNQNRISGQALDFKQLNV
HAWEAFDKGQDIHLQAAPSQAELLYKNYKVIKEKLKSHTKDAIMEKYGNAAAEEKLPREL
LLGQSERQVEYDRAGRIVKGLEMALPKSKYEEDVFINNHTSVWGSWWKDHQWGYKCCKQT
IRNSYCTGAAGIEAAEAAADLMKSNIARKATSEDTPAPAEEKKLATWGSEVPDDIVLDQK
KLTEALKKEDERRKEEKDERKRKYNVRWNDEVTAEDMEAYRMKKVHHDDPMKDFLN
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcatcagttgcattcaaatctagggaggatcatcgcaaacaactagaatta
gaggaagcacgtaaagcagggcttgcaccagctgaggttgatgaagatgggaaagaaatc
aaccctcacattcctcaatatatgtcctctgcaccttggtatcttaatgctgagagacca
agtttaaaacatcaaaggaaatggaaatcagatccgaattatacaaaatcctggtacgac
agaggtgcaaaaatacatcaggcagacaagtataggaagggtgcatgtgaaaattgtgga
gcaatgacgcataatgcaaaagcatgcatggaaaggccccgaaaggtaggagccaaatgg
acaaacatgcacatagcaccagatgaaaagatcgagacgtttgaattagattatgatgga
aaaagggatcgttggaatggttatgatccagcaacctatgctcgtgtaattgagaggtat
gaggctagagatgaagcaaggagaaaatttttgaaagaacaacaactaaagaaattggaa
gagaaaaataataagcagaatgaggatgctgaagttagtgatgaagatgaggatgaagat
gatttgaaggttgatgaggcaaaggttgatgaaagcaagcaaatggactttgcaaaagtt
gagaagcgtgttcgtacgacaggtggtggaagcacgggaactgttaggaacttgcgtatc
cgggaagatacagccaaatatcttttaaatctcgatgtcaactcggcttattacgatccc
aaaactcggtcgatgcgtgaagatcctcttcctgatgcagatccaaacgagaaattttat
ggaggtgataaccaaaatagaatcagcgggcaagctttggatttcaagcaactcaatgtg
catgcttgggaagcatttgacaaaggtcaagatatccatctgcaagctgctccatcacaa
gccgaacttctgtataagaactataaggttattaaagagaaattgaagtcacacacgaag
gatgccatcatggagaagtatgggaatgctgctgcggaggaaaagctgcctcgggaactt
ttattgggacagagcgagaggcaagttgaatatgatcgtgctggcagaattgttaaaggc
ctggagatggctcttcccaaaagtaaatatgaggaagatgttttcattaacaaccacacg
agtgtttggggctcatggtggaaggatcaccagtggggttataaatgctgtaagcaaacc
atccggaacagttattgcactggagctgctggaattgaggctgctgaggcagcagctgac
ttaatgaagtctaatattgctcgtaaagcaacttctgaagatacaccagccccagcagaa
gagaaaaagctggctacatggggaagtgaagtacctgatgatattgtcctcgaccagaag
aaacttactgaagctctaaagaaggaggatgaaagaaggaaggaggagaaggatgaaagg
aaacgtaaatataatgtgagatggaacgatgaggtaactgctgaggacatggaagcgtat
aggatgaagaaggtacatcatgatgatcccatgaaggattttctcaactaa
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