Benincasa hispida (wax gourd): 120092454
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Entry
120092454 CDS
T07258
Name
(RefSeq) probable pectate lyase 8 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj00040
Pentose and glucuronate interconversions
bhj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120092454
Enzymes [BR:
bhj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120092454
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Methyltransf_9
Motif
Other DBs
NCBI-GeneID:
120092454
NCBI-ProteinID:
XP_038906468
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Position
12:complement(49105909..49109857)
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AA seq
449 aa
AA seq
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MAALSKWPSLSLFALALVFFVTIALVRKEKTSEIRTVLATEFQSSSNSLMATRVKNDDVE
QELNNEHAVDNPDEIAASVEMSIRNSTERRKLGYFSCGTGNPIDDCWRCDSNWHRNRKRL
AECGIGFGRNAIGGRDGRFYVVTDSSDHDPVNPKPGTLRHAVIQEKPLWIVFKRDMVIQL
KQELIMNSFKTIDARGVNVHIANGACITIQFVTNIIIHGLHIHDCKPTGNAMVRSSTTHF
GWRTMADGDAISIFGSSHIWIDHNSLSNCADGLVDAVMGSTAITISNNHFTHHNEVMLLG
HSDSYTKDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTIN
SQGNRYAAPTNPFAKEVTKRVETPESEWKGWNWRSEGDMLLNGAYFTPSGAGASASYARA
SSLGAKSASMVGSITSSAGSLPCRRGHPC
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacttagcaaatggccttctctgtctctctttgcccttgcattggtgttcttc
gtaacaatcgctctggttcgcaaagaaaagacctctgaaattaggactgtgttagcgacg
gagtttcagagctctagcaactcattaatggcgactagggtgaagaatgatgatgtggag
caagaactcaacaatgaacatgctgtggataatcctgacgagattgctgcctctgttgag
atgagtatccgtaatagcactgaaaggaggaagttgggatacttctcctgtggaacaggc
aatcccattgatgactgctggcgttgtgactccaactggcaccgtaaccgtaagcgtctt
gcagaatgtggcatcgggtttggtcggaatgctattggtggacgtgatggtcgtttctat
gttgtcactgattcgagtgaccacgatccggtgaacccaaagccagggactcttcgtcat
gctgtcattcaagagaaacctctttggattgtgttcaaaagggacatggtgattcaattg
aaacaggaacttatcatgaacagttttaagacaattgatgctcgaggggtaaatgtacac
attgccaatggcgcttgtatcacaatccagtttgtgactaacatcattatccatggtctt
cacatccatgattgcaagcccacagggaatgccatggtgagaagctcaacaactcatttt
gggtggagaaccatggctgatggagatgccatttccatctttggatcaagccatatatgg
attgatcacaattcactctctaattgtgctgacggactcgttgatgctgtcatgggctca
actgcaatcacaatctccaacaatcacttcactcaccacaatgaggtgatgcttctaggc
catagtgattcctacacaaaggacaagcaaatgcaagtcaccattgcttataaccatttt
ggagagggactcattcaaagaatgccaagatgtaggcatggctatttccatgtggtgaac
aatgactacactcactgggagatgtatgccattggtgggagtgcaaaccccaccatcaat
agtcaaggcaacagatatgcagctccaaccaacccctttgccaaagaggtgacaaagcga
gtcgaaacgccagagagcgaatggaagggttggaattggagatcagaaggagatatgttg
ctgaatggtgcttatttcactccatcaggtgctggagcttcagcaagctatgccagagcc
tccagcttaggagccaaatctgcttccatggttggatccatcacttcttctgcaggttcg
ctcccttgccgccgaggccatccctgctaa
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