KEGG   Benincasa hispida (wax gourd): 120092837
Entry
120092837         CDS       T07258                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7-like
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
bhj  Benincasa hispida (wax gourd)
Pathway
bhj03020  RNA polymerase
bhj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bhj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    120092837
  09124 Replication and repair
   03420 Nucleotide excision repair
    120092837
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bhj03021]
    120092837
   03019 Messenger RNA biogenesis [BR:bhj03019]
    120092837
   03400 DNA repair and recombination proteins [BR:bhj03400]
    120092837
Transcription machinery [BR:bhj03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     120092837
Messenger RNA biogenesis [BR:bhj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     120092837
DNA repair and recombination proteins [BR:bhj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      120092837
SSDB
Motif
Pfam: SHS2_Rpb7-N S1 Vg_Tdu
Other DBs
NCBI-GeneID: 120092837
NCBI-ProteinID: XP_038906991
LinkDB
Position
12:32782045..32786038
AA seq 176 aa
MFFHIVLERNMQLHPRHFGRNLRDNIVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDVPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPSAA
NT seq 531 nt   +upstreamnt  +downstreamnt
atgttcttccacatagttttggagaggaatatgcagctacacccacggcattttggccgt
aacctccgtgacaacatcgtctcaaaacttatgaaagatgttgagggcacttgcagcggc
cgtcatggtttcgtagtggcaattacaggaattgagaatatagggaaaggattgattcgt
gatgggacaggtttcgtcacttttcccgtcaaatatcaatgtgtcgtgtttagaccattc
aagggagaaattttagaagcagttgttactatggtaaacaagatggggttctttgctgaa
gctggaccagtccagatttttgtttcaaaccatttgataccagatgatatggagtttcag
tccggggatgtgccaaactataccacttcggatggatcagttaagattcagaaggacagt
gaagttcgattgaagataatcgggactcgagtagatgcaactgaaattttttgtattgga
accataaaagatgacttcttgggtgtgatcaatgacccttcggcagcttag

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