Benincasa hispida (wax gourd): 120092859
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Entry
120092859 CDS
T07258
Name
(RefSeq) nuclear pore complex protein NUP160 isoform X1
KO
K14303
nuclear pore complex protein Nup160
Organism
bhj
Benincasa hispida (wax gourd)
Pathway
bhj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120092859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhj03019
]
120092859
03036 Chromosome and associated proteins [BR:
bhj03036
]
120092859
Messenger RNA biogenesis [BR:
bhj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120092859
Chromosome and associated proteins [BR:
bhj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120092859
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP160_helical_2
Beta-prop_Nup120_160
TPR_NUP160_120_M
HEAT_Nup120
TPR_Nup160_C
NUP160_helical
Nucleoporin_N
Beta-prop_WDR35_2nd
Motif
Other DBs
NCBI-GeneID:
120092859
NCBI-ProteinID:
XP_038907016
LinkDB
All DBs
Position
12
Genome browser
AA seq
1509 aa
AA seq
DB search
MGRRMPLAGMETSLMATESVEFIDVSLSSSSSREAAITSVPSQATNSLTDDHASCVVVGD
PPTYLIWRIRKILPHVVELLEFSTANEFRRIGLRIAFPETLHPAVFVCKNEISSSAGHPF
LMYAVTSSGVAYCLKLRNISSYVSYSVIPLDEVVEVNLQTHPDNKPVTSVSAISGCLVIG
RNDGSVSCYKLGSLDQHTPGFEHELREDSGFNRLLGFISRVKLAGAVQDMVISEVCGRQF
LFVLHSDGVLRVWDLSCHSRVLNHSMNIATLAEARFVRLWVGQASTDLSTIPLAILYKHP
EDLNLEMICIYSLCFSWGDRVGLLLQPSTHNIPLNQGGCLDVKLASDKIWVLKDNALIFL
DLLASDGHSGEAQCYALQEEFIADQLFQSADYSSDTVLWVSHSIFSSTKDEVVPFISSIF
VRRLLQPGVYNERALRATLLEYSRHWTDSNFQSMTSDELKQEILSLIEDEGATGTPVSIY
LWWKSFCTHYIHHWCTDNAPSFILIDNTSAAVGLVRRNSVSLFRCLDNVEQLLDGFSGEL
DELGGPDIDWSGNDSDSELLFEVLRCVISISHRLGKTTLAIFYESLMSTPIIPFGEIVGR
ILKVLENGYSSSVAMRSDLQAGCGWERELADKKNLRKFSVDMMLSLHTLCKKGASWDRVL
DVIESFLKYFVPRKMSHKVQPQTSSDANTSILVHATSQISKVMLESALDVLLLLNYMVSV
SGQIGLLHDDTSRIKLELIPMIEEIICEWHIIHFLAITPSESAAVEDFSSQLSLLQIDTH
GGKEIWKGKLGKCDFTLASLLLLMMNSSAEGPIYLSTKCLLNPQDIVLATQNFTSWVIWG
NSREPSAFLNTSTELSLVLLRHGQYDAVEYLLSVVKAQSQNEKTSHCMQDADGGWSVMHH
LLGCCQLGQAHYKLHGPVKERKVHEAICSFFRASSGNSSFQALQSLPHEVGFSFESTGCV
SSVAWKFHYYQWSMQLFEQYNISKGAFEFALAALELVEEAVSPKDDYCGRLPFNESAITV
QGRLWANVFKFALDLHQLSDAYCAIISNPDEESKHICLRRFIIVLYECDAIKILCCGELP
FIGLVEKVEQELVWKAERSDLLSRPSLYKLLYAFEIHRHNWQKAASYIYLYSARLRMEGA
LGDNQFSSSLLLERLNGLSAAINALHLVHPDFAWIEAPVERDAIQSKHYPSKKAKRTVDE
QFARDDTKPQKQHIYIDMKQLENEFVLTSSEYLLSLANIKWPFTDSRLSGIHEAPSELVD
LLVQNNFYDMAFSVVIRFWRDSALKRELERVFSAMSLKCCPSRSGSSAVLNDPRINSLLL
ISPNGGGDVHGPLDVLPSSQQIDGNGHWETLELYLEKYKGFNARLPLVVAETLLRLDSQM
ELPIWLVLMFKDGRRAKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMPP
ADLINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDACEKLRNLLHGALLNHLKLLKVE
ADDIISAIA
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtaggatgccgttggccggaatggagacctctctcatggctaccgaatctgta
gaattcattgacgtttctctttcttcttcctcatcaagagaggccgccattacttccgtt
ccttcacaagctaccaactcattgactgacgaccatgcctcctgcgttgtcgtcggagat
cctccaacttatctcatctggaggattcggaagattctacctcatgtagtcgaattgctt
gagttttcaactgccaacgagtttcgtagaattggtctgcgaattgcctttcctgaaaca
cttcatccggccgtgtttgtttgcaaaaatgagattagttcgtcggcgggacatcctttc
ttgatgtacgcagtgacttcgtctggtgtcgcttattgtttgaagctacgaaatatttcc
tcatacgtatcttactctgttattccgctcgatgaggttgtggaggttaatttacaaacc
catccggacaacaaaccagtaaccagcgtatctgctatatctggatgtctcgtgattggg
agaaatgatggatcagtttcatgttacaaacttgggtcgcttgaccaacataccccaggc
tttgaacatgaactacgggaggattcaggattcaatcgtttgttgggtttcatttcgagg
gtcaagttggcaggagctgtgcaagatatggtaatatctgaggtctgtggaagacaattt
ctgtttgttcttcattctgacggagtcttacgagtgtgggatctttcatgtcatagtagg
gtactcaatcactcgatgaatattgcaactttggcagaagcaaggtttgtgagattgtgg
gtgggtcaagctagcactgatttgagtacaattcctttggcgattctctataaacacccg
gaggatcttaacttggaaatgatctgcatatatagcttatgttttagttggggagatagg
gtcggcctattgttgcagccttcaacacacaatattccgttgaatcagggtggatgtctt
gatgtaaaacttgcatctgataagatatgggtcttaaaggacaatgcattgatctttctc
gacttgttagcttctgatggtcattcgggagaagcacaatgctatgctttgcaagaagag
tttattgccgaccagttgtttcagagtgctgattattcttctgatacagttctttgggtt
tcacattcaatattttcttctacgaaggatgaggttgtgccgttcatatcttctatattc
gtgcgcagactactacagcctggagtttacaatgaaagggctcttcgtgcgactttgctg
gaatatagtaggcactggacagattcaaactttcaatctatgacttctgatgaactgaaa
caagaaattctttctctcattgaagatgagggagcaactggaactcccgtttcaatatac
ctatggtggaaaagtttctgtacccattacatccatcattggtgcacagacaatgcacct
tctttcatacttatcgacaatacatcagctgcagtgggattagtgagaaggaattcggta
tcactttttagatgcttggacaatgttgaacaacttttagacggtttttctggggaactc
gatgaacttggtggccctgacatcgattggagcggcaatgattcagattcagaactcttg
tttgaggtcttgagatgtgttattagtattagccatcgtttgggaaaaacaactttggct
atattttacgagtcactaatgagcacaccgattattccttttggagaaattgttggtaga
attttgaaggttctggaaaatggatatagctcgtctgtggcaatgaggtcagatcttcaa
gctgggtgtggttgggaaagagaactggctgataagaaaaatcttagaaaattttctgtt
gatatgatgctatctcttcatactttgtgcaaaaaaggtgcctcgtgggacagggtttta
gatgtcattgaaagttttctcaaatactttgttcctcgaaagatgtctcacaaagtacag
cctcaaacatcatcagatgccaatacctccattttggttcatgcaacctcacaaatttcc
aaggttatgcttgagtcagcgttagatgtcctgttgttactaaattatatggtctccgtc
agtggacagattggcttactccacgatgacacatcgagaataaaacttgaattaattcca
atgattgaggaaattatttgtgagtggcacattattcatttccttgctatcacgccatct
gagtcagctgcagttgaggattttagttctcaactttcacttttacaaattgatacacat
ggaggtaaagaaatatggaaggggaaacttggaaaatgtgactttacattggcttcttta
cttctgttaatgatgaattcttcagctgaagggcctatctacctgtctaccaaatgtctt
cttaatccgcaggacattgttcttgcaacacaaaattttaccagctgggttatttggggg
aacagtagagaaccttcagcttttttaaatacttcaactgagctttcactggtactgcta
aggcatggccaatatgatgctgttgagtacctgctcagtgtcgtgaaggctcaatcacag
aatgagaagacgtcacactgtatgcaagatgcggatggtggatggtctgtaatgcatcac
ctgcttggttgttgtcaacttggtcaggcacattataagttgcacggaccagtgaaagag
aggaaggttcacgaagctatatgcagtttcttcagagcttcatctggaaacagttctttt
caggctttgcagagtttgcctcatgaagtgggattttcttttgagtctactggttgtgta
tcaagtgtcgcatggaagttccattactatcagtggtctatgcaattgtttgagcagtat
aatatcagcaaaggtgcttttgagtttgctcttgctgcacttgagctagtggaagaagct
gtaagcccaaaggacgattattgtggtagacttcctttcaatgaatctgccattactgtc
caaggacggctttgggcaaatgtcttcaagtttgcattggatctacatcaactctctgat
gcatattgtgcaatcatttcaaatccagatgaggagagcaaacatatctgcttaagacgt
ttcataatagtcctttatgaatgtgatgccattaagattctttgttgtggagaattacca
ttcattgggttagtagaaaaggtagagcaagagcttgtatggaaggcagaacgttctgat
ctcttgtcaaggccaagcttgtataagttgctgtatgcctttgaaatacaccgacataat
tggcagaaagcagcaagttatatctacctttattcagctcgtttgagaatggaaggagct
ctgggagataaccagttcagttcctcattgctgttggaaagattgaatggcctttctgct
gctattaatgcattgcaccttgttcatcctgattttgcctggattgaagccccggttgaa
agagatgctatccagagtaagcactacccaagtaagaaagctaaaagaactgttgatgaa
cagtttgccagagatgacaccaagcctcagaagcagcatatttatatcgatatgaagcaa
ctagaaaatgaatttgtgctaacttcatcagagtatctcctttcattagcaaatatcaaa
tggccattcactgactctcgtttgtcagggattcatgaggccccttcagagttagttgat
cttctggtccagaacaatttttatgatatggcattttctgttgtaataagattctggcga
gattcagcattaaagagggagttggaaagagttttctctgccatgtcattgaaatgttgt
cctagtagatcaggttcatctgcagttctgaatgatccaagaataaatagtcttttattg
atatccccaaatggtggaggtgatgttcatggtccacttgatgtgctgcctagcagtcag
cagatcgatggaaatggtcattgggaaaccttggaactttatcttgaaaaatataaaggt
ttcaacgctagattgcctcttgttgttgcagaaacacttctccggttggactcccagatg
gaattgcctatttggctggttcttatgtttaaggatggtagaagggcaaagacatggggg
atgactggtgaagaatcaaatccagcatcgttgtttcgactatatgttgaatatggtcga
tatacagaggctacacatctgttgcttgaatgcatggaatcatttgcatcaatgccacca
gcagacttaattaacagaaaaagaccattctctgtttgcttcccctacaatgccgttcaa
tacttatggtgcaaaatagatgaattgatccggtcaggtcacatggtagatgcttgtgag
aagctgagaaacctattgcatggtgctttgttgaatcatctgaagctgcttaaagttgag
gcagacgatatcatatctgccatcgcttaa
DBGET
integrated database retrieval system
