Benincasa hispida (wax gourd): 120092892
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Entry
120092892 CDS
T07258
Name
(RefSeq) DNA mismatch repair protein MSH4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
bhj
Benincasa hispida (wax gourd)
Brite
KEGG Orthology (KO) [BR:
bhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bhj03036
]
120092892
Chromosome and associated proteins [BR:
bhj03036
]
Eukaryotic type
Meiosis-specific proteins
Others
120092892
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_22
TK
AAA_27
Motif
Other DBs
NCBI-GeneID:
120092892
NCBI-ProteinID:
XP_038907062
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Position
12:15372492..15405543
Genome browser
AA seq
792 aa
AA seq
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MEDDAGERSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM
VILVPPNKLAPDGMVGVSVLADRFFATVKKVVMARACFDDTKGAVLIKNLAAKEPSALGL
ETYYKQYYLCLAAAAASIKWIEAEKGIIVTNHSLLVTFNGSSDHVSIDATSVQNLEIIEP
LHSNLWGTSNKKRSLYNMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ
LFFGLSQALRKFPKETDRVLCHFCFKQKKATNEVLRAANAKKSQNLISSIILLKTALEAL
PLLSKVLKEAKSFLLANIYKSVCENEKFATIRKRIEEVIDEDVLHARVPFIARTQQCFAV
KAGIDGLLDIARRTFCDTSEAIHNLANKYREEYKLPNLKLPFNNRQGFYLSIPHKDVQGK
LPSKFIQVLKHGNNIRCSTLELASLNVRNKSAAGECYIRTEICLEGLVDAIREDVSMLTL
LAEVLCLLDMIVNSFAHTISTKPVDRYNRPNFTDNGPMAIEAGRHPILESIHNDFVANSI
FLSEAANMIIVMGPNMSGKSTYLQQMCLLVILAQIGCYVPAHFSTLRVVDRIFTRMGTDD
SLESNSSTFMTEMKETAFVMQNVSQRSLVVVDELGRATSSSDGFAIAWSCCEHLLSLKAY
TIFVTHMEGLSELATVYPNVKVLHFHVDIRNNRLDFKFQLKDGMRHVPHYGLSLAEVAGL
PSSVIETARDITSRIMEKEERRMEINYLQYHPIRMAYNVAQRLICLKYSSHDEDSIREAL
QNLKEGYISGRL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgatgcaggcgagagatcgagcttcgttatcggtctaatagagaacagagct
aaggaggttggagttgctgcatttgacttgaggtcagcttcacttcatctttctcaatat
atagagaccagcagctcgtaccagaatacaaaaactttgctacatttctatgatccaatg
gttatacttgttcctccaaacaagctcgcacctgatggcatggttggagtttctgttttg
gctgatagattttttgctacagtgaagaaggttgtaatggctcgtgcttgctttgatgac
acaaagggtgctgttctgattaagaatctggcagccaaggagccttcagctcttggttta
gaaacttattacaaacagtactatctctgcctggctgctgctgctgctagcattaagtgg
attgaagcagagaaggggataatcgtgaccaatcactctttattggtcacgttcaatggc
tcatctgatcatgtgagcattgatgcaacgagcgttcagaatttagaaattattgagcca
cttcactccaacctttggggaacaagtaacaagaagagaagtctgtacaacatgctcaag
acaacaaaaactataggagggtctagacttcttcgtgccaatcttttgcagccattaaaa
gatattgaaaccattaatgcccgtctggattgcctggatgaattgatgagcaatgaacaa
ttatttttcgggctttctcaagctcttcgtaaatttcctaaagagactgacagagtactt
tgtcacttctgtttcaagcaaaagaaagctacaaatgaagttttgcgtgctgctaatgct
aaaaagagccaaaatttgatatctagcattattcttctaaaaactgcccttgaggcattg
cctttactctcaaaggtacttaaggaagcaaagagttttcttcttgcaaacatttacaaa
tctgtttgtgaaaacgaaaaatttgcaaccattagaaagaggattgaagaagtgatcgac
gaagacgttcttcatgcaagggttccttttattgcccgcactcaacaatgttttgcggtt
aaggctggaattgatggactgttggatattgcaagaaggacgttctgtgatactagtgaa
gctatacataatcttgctaacaaataccgagaggagtacaagttacccaatttaaaactg
cctttcaataataggcaagggttttacttgagcattcctcacaaagatgtccaaggaaag
cttcctagcaagtttattcaggtcttgaagcatgggaacaatatacgatgctctaccctg
gaacttgcttctctgaatgttagaaacaagtctgctgcaggagaatgctatattcgtaca
gaaatttgcctggaaggactggtagatgccataagagaggacgtctctatgctgacactg
ctcgcagaagtcttgtgcctcttagatatgattgtcaattcatttgcacatacaatatca
acaaagcctgttgatcgatataataggccaaactttacagataatggtccgatggcaatt
gaagctggaagacacccaatcctagaaagtatacacaacgattttgttgctaacagcata
tttctatcggaagcagccaacatgataattgtcatgggtccaaatatgagtggaaagagt
acctaccttcaacaaatgtgccttctagttattcttgctcaaattggatgttatgttcca
gcacatttctcaaccttgagagttgttgatcgtatattcacacgaatgggcacagatgat
agtctagagtccaactccagcacattcatgacagagatgaaggaaacagcttttgtaatg
cagaatgtctctcaaagaagtctcgttgtcgtggatgaacttgggagggcaacttcttcc
tctgatggatttgcaattgcatggagctgctgcgaacatcttttgtcactcaaagcttat
accatatttgtcactcatatggagggcctatcagagctagcaaccgtctacccaaacgta
aaagttcttcacttccatgtggatataaggaataaccgtttggatttcaagttccaatta
aaggatggaatgagacatgtaccacactatggcctttcattagcagaagtggctggattg
cccagctcggtaattgaaactgctagagacattacttccaggatcatggagaaggaagaa
agacggatggagataaactacttgcagtatcatccaatcagaatggcctacaatgtagct
cagcgtctgatatgtttgaaatactccagccacgatgaagattcaatacgagaagcattg
caaaatcttaaagagggctacattagtggcaggctatga
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