Benincasa hispida (wax gourd): 120093019 Help Entry 120093019         CDS       T07258                                  Name (RefSeq) THO complex subunit 2   KO K12879   THO complex subunit 2 Organism bhj  Benincasa hispida (wax gourd) Pathway bhj03013   Nucleocytoplasmic transport bhj03040   Spliceosome Brite KEGG Orthology (KO) [BR:bhj00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     120093019   09122 Translation    03013 Nucleocytoplasmic transport     120093019  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:bhj03019]     120093019    03041 Spliceosome [BR:bhj03041]     120093019 Messenger RNA biogenesis [BR:bhj03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      120093019 Spliceosome [BR:bhj03041]  Complex C   Other components    EJC/TREX     120093019  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     120093019 SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 ABPF_N LIM_bind Motif Other DBs NCBI-GeneID:  120093019 NCBI-ProteinID:  XP_038907239 LinkDB All DBs Position 12 Genome browser AA seq 1889 aa AA seqDB search MALPPVECMYVVESNLREWKSGNSSFRVPQPVPVLRFLYELCWTMVRGELPFQKCKAALD SVEFSDKVSAEELGSTLADVITQLAQDITLAGEYRARLLKLAKWLVESAFVPLRLFQERC EEEFLWEAEMIKIKAQELKNKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCRVTDAS DNSFPGSTIGIIKSLIGHFDLDPNRVFDIVLECFELQPENRVFVELIPIFPKSHASQILG FKFQYYQRIEVNSPVPFGLYKLTALLVKEKFIDLDSIYAHLLPKEDEAFEHYGSFSSKRL DEATRIGKINLAATGKDLMDDEKQGDVSIDLFAALDMESEAVNERSPELENNQTLGLLTG FLSVGDWCHAHVLFDRLSPLNPVEHLPICNSLFRLIEESISSAYSIVRQNPYQSLGASSG TSIDTFDTTNLPVGGSFIDLPRELFQMLTAAGPYLYRDTILLQKVCRVLRGYYASAIEFV NSVESGPNLELVMPAGNRVPHLHLKEARLRIEEALGTCLLPSLQLIPANPAVGQGIWEVM NLLPYEVRYRLYGEWERDDEKIPMVLAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAH ANPMTVLRTIVHQIEAYRDMITPVVDAFKYLTQLEYDILEYVVIERLAQGGRDKLKDDGL NLSDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKKGQGIELVLLQELVQQMANVQYT ENLTEEQLDAMAGSETLRFQATSFGVTRNNKALIKSSNRLRDSLLPKDEPKLAVPLLLLI AQHRSLVVINADAPYIKMVSEQFDRCHGTLLQYVEFLSSAVTPASAYAQLIPSLNDLAHL YHLDPEVAFLIFRPIMRLFKCQGGSDIFWPLDGNDANVVGNNSDLEPAECSADVVLDLGS LQKPVRWSDLLDTVKSMLPPKAWNSLSPDLYTTFWGLTLYDLYVPRSRYESEIAKQHSAL KALEELSDNSSSAINKRKKDKERIQESLDRLSNELVKHEENVASVRRRLSREKDKWLSSC PDTLKINMEFLQRCIFPRCTFSMPDAVYCAMFVHTLHSLGTPFFNTVNHIDVLICKTLQP MICCCTEYEAGRLGRFLYETLKIAYHWKSDESIYERECGNMPGFAVYYRYPNSQRVTYGQ FIKVHWKWSQRITRLLIQCLESTEYMEIRNALIMLTKISNVFPVTRKSGINLEKRVAKIK SDEREDLKVLATGVAAALAARKPSWVTDEEFGMGYLELKIAPSLASKPSAGNLAASQNNS IYLSQNEPGGGKTTALTNPNSDSGNMAKDHSLRSRTTDVRTDKIDGLSVPKSELGHGKLK GTTLNGPDSQPLVPSTSVNSGSLRMVESQKPGDDLSRMLDEGSSKVVSKTSSESELRVPA KRSAPVASLNKAPKQDISKDETRSGKAAGKNPGSSTNERELPVHATDGGRHGSSSNAPSS VMPNGNTQSSLTKGSSLSVKASDSHTNESKAESGVGRTSDARASSVKDDGTEALDVARSS SSRLAHSPRHESSAGGSRSSDKLQKRASPAEEPDRQGKRRKGDGEIRDVDGDFRISDKDR SMDPRSVDVDKLGTDEQSGYRGSDKLLDRTKDKVNERYDRDYRDRVERPEKSRGDDPSVE RTRDRSIERYGRERSVEKVERVSDRYPEKSKDERNKDDRSKLRYSDSTVEKSHIDDRFHG QSLPPPPPLPPHMVPQSVNSGRREEDPDRRFGTTRHAQRLSPRHEEKERRRSEENLISQD DAKRRREEEFRERKREERDVGMSLKVDDREREREKANLLKEDMDASAASKRRKLKREHLS LVEAGEYSPVGPPQPPMGGGVSQSYDGRERGDRKGVMMQRAGYLDDPGLRIHGKEVVNKM TRREADLMHDREWDDEKRMRADQKRRHRK NT seq 5670 nt NT seq  +upstreamnt  +downstreamnt atggctctccctccggttgagtgtatgtatgtcgtagaaagcaatcttcgagaatggaag tccgggaactcgagctttagggttcctcaacccgtccccgtgcttcgcttcctttacgag ctctgctggaccatggtacgaggcgaattgccatttcagaagtgtaaagcagcattggat tcagttgagttctcggacaaagtgtctgcggaggagttaggatcaactttggctgatgtc attacgcaattggctcaagatatcacattagcgggagagtatcgtgctcgtcttttaaaa ttggctaagtggctggttgaatctgcatttgtcccattgaggctttttcaggagcgatgt gaggaagaatttctatgggaggctgaaatgataaagattaaggcgcaagaattgaaaaat aaagaggtcagagtaaatactcgtcttctttatcagcaaacaaagtttaatcttctgcgg gaggaaagtgagggctatgccaagttggtaacacttctttgccgggtcaccgacgcttca gataatagttttccaggttcaacgattggtattataaagtcattgattgggcattttgat ctggacccaaaccgtgtttttgacattgtcttggagtgttttgaactgcagccggaaaat agagttttcgtggagctaataccaatatttcccaagtctcatgcttcacaaatccttggg ttcaaatttcagtattatcagcgtattgaagtaaattcaccagttccatttggactttat aagcttacagcgttactagtgaaggaaaagtttattgatcttgatagcatatatgcgcac ctacttcccaaggaggatgaggcatttgagcattatggttccttttcatccaaacgacta gatgaggctaccagaataggtaaaataaatcttgcggcaactggaaaggatctaatggat gacgaaaagcaaggagatgtaagcattgatctttttgctgctcttgacatggaaagtgag gcagtcaatgaaaggtctccagagctggaaaataatcaaacattgggcttgcttactgga tttctttctgtgggtgactggtgtcatgcacatgtactgtttgatcggctttcacctctc aatccagtggaacatcttccaatttgtaacagcttgtttaggctcattgaagaatcaatc tcttctgcatactctattgttcgtcagaatccttatcagagcttgggggcttcttcggga actagcattgatacttttgataccacaaatttgccagttggtggttcttttatagatctt ccgagagaacttttccagatgctcaccgctgctggaccttatctctatcgtgatactatt ctgctccagaaggtttgtagggtgctgagaggttattatgcatcagcaattgaatttgtc aacagtgtggaaagtggtccaaatcttgaacttgttatgccagctggaaatcgggttcct catcttcacttaaaggaagctaggttgaggattgaggaagccttaggaacatgcctactt ccttctttacagttgatacctgccaatccagctgttggtcaaggaatatgggaagtaatg aatcttcttccttatgaggtgcgatatcgtttatatggtgaatgggagagagatgatgag aagattccaatggttttggctgcaaggcaaactgcaaagttggatacccggaggattttg aagcggttggctaaggagaacttgaagcaattgggtaggatggttgcaaaacttgctcat gctaatccaatgactgtccttcggacaatagtacaccagattgaggcatatagggatatg attactccggtagtagatgcattcaaatatttgactcagcttgagtatgacatattggaa tatgttgtaattgaacgtttggcacaaggagggcgtgataagttgaaggatgatggcctt aatctctcagattggctccagtcattagcctcattttggggtcatctgtgtaagaagtac ccatctatggaattaaggggtttgtttcagtatctcgttaatcagttgaaaaaaggccaa ggaattgagctagttctcctgcaggaacttgtccaacaaatggctaatgtccaatacaca gaaaacctaacagaggagcagttggatgctatggcaggaagtgagacacttcgttttcaa gcaacttcttttggagttactcgaaataacaaggcgttgatcaagtcaagcaacagacta cgtgactcattgcttcctaaggatgaaccaaaattggcggtccctcttttgctacttatt gctcaacaccgttcattggttgttataaatgcagatgctccttatataaagatggtcagc gagcagtttgatagatgtcatggaactctgcttcaatatgtggaatttcttagcagtgca gttacacctgcttcggcttatgctcagttgattccctcactcaacgatcttgcccatctt tatcatctagatcctgaggttgctttcctgatttttcggccaataatgaggctatttaag tgtcagggtggttctgatatcttctggccactggatggaaatgatgcaaatgttgtaggc aataattctgatctggaacctgcagaatgttctgctgatgttgtattggatcttggttct ttacagaaacctgtgaggtggtcagatctgcttgatactgtgaagtctatgttacctcca aaagcttggaatagcttgtctccagatctctataccacattttggggtctcactctctac gatctttatgttcctcggagtagatatgaatctgaaattgctaagcagcattctgctctt aaagctttagaagagctctctgataactcaagttctgcaatcaacaaaaggaagaaagac aaagaaagaattcaagaatctcttgatcgcctgtccaatgaacttgttaagcatgaagaa aatgttgcatccgttcgtagacgactttctcgtgaaaaggataagtggttgagctcctgt cctgatactctgaaaattaacatggagttccttcagcgttgtatttttcctcgctgtaca ttcagtatgcctgacgctgtctactgtgctatgtttgtgcacactcttcattcccttgga acaccatttttcaatacagtcaaccatattgatgttttgatatgtaaaaccttgcaaccc atgatatgctgctgtacggaatatgaagccggcaggcttggaaggtttttatatgagaca ctaaagatagcatatcattggaagagtgatgaatccatttatgaacgtgaatgtggaaat atgcctggattcgctgtctattataggtatccaaatagccaaagagtaacgtacggccag ttcatcaaggttcattggaagtggagtcaaagaattacacggttactgatacaatgcttg gaatctactgaatacatggaaattagaaatgctcttataatgttaacaaaaatttccaat gtgtttcccgtcactagaaagagtgggatcaaccttgagaaacgggttgccaagatcaaa agcgatgaaagagaagatttgaaggttttagctactggcgttgctgcagccttggctgct agaaagccttcatgggttacggatgaagaatttggcatgggttaccttgaattaaagatt gcaccatctcttgcatcaaagccttcggctggtaatttagctgctagccaaaataattcc atttatctctcccaaaatgaacctggtggagggaagaccactgcattaaccaaccctaat tcagattctggaaatatggccaaagatcattcattgaggtcaagaactactgatgtgaga acggataaaatagatggtctctctgttccaaaatctgagcttgggcatgggaaactgaaa ggcacaacattgaacgggccagattcccagccactggtaccctcaacttctgtgaattca ggatccttaagaatggtggaaagtcagaaaccaggtgatgacttaagtaggatgttggat gagggctcatcaaaagttgtttcaaagacctcttctgaatcggagttaagagttccagca aaacgatcagcgcctgttgcgtctcttaataaagcaccaaaacaagatatctcaaaagat gaaactagatcaggaaaagctgctggcaagaatcctgggtcttcgacaaatgaaagggag cttccagttcatgcaacagatggtggtaggcatggaagttcttccaatgcaccttcttcc gttatgccaaacggtaatacacaaagttcattaactaaaggctcgtccttatcggtaaaa gcttcagatagtcacactaatgaatcgaaggcagagagtggggttgggaggacatctgat gctagggcttcatcagtgaaggatgatggcactgaagctcttgatgttgccagatcctct tcttccagacttgctcattctcccaggcatgaaagttctgccggtggttctagatctagt gataagctgcaaaaaagagctagtcccgcagaagaaccagacagacaaggtaaacgccgg aaaggagatggtgaaatcagggatgtagatggggattttcgtatctctgacaaagataga tccatggacccacgatctgtagatgttgataaattaggaacagatgaacaaagtggttac agaggctcagacaaacttttggatagaacaaaagataaagtaaatgaaaggtatgatagg gactacagagaccgggttgagcgccctgaaaagtcccgtggagatgatccttcagtagaa agaacaagagacagatcaatagaaagatatggaagagagcgctcagtcgagaaggtggag agagtttctgataggtatcccgaaaaatctaaggatgagagaaataaagacgataggagc aaattacgatacagtgattcaactgtagagaagtctcatattgatgatcggttccacgga cagagcttgccacctccgccacccttgcctccacacatggtccctcaatctgttaatagt gggagaagagaagaagatccagataggaggtttggaactactagacatgctcaaaggctt tctcctaggcatgaagagaaggaacgaagacgatcagaggaaaatttaatttcacaggat gatgcaaaacgcagaagggaagaggaatttcgagaaagaaagagagaagagagagacgtg gggatgtcattgaaggtggatgacagggagagggagagggaaaaggcaaaccttttgaag gaggacatggacgcgtctgccgcctctaagaggcgaaaacttaaaagggagcatctgtca ttagttgaggctggtgaatattctcctgttggcccaccacaaccccccatgggtggtggt gtgtctcagtcttatgatggacgagaaagaggagaccggaagggagttatgatgcagcgt gctggttacctggatgacccaggcttgagaattcacggcaaagaagtggtcaacaagatg acaagacgtgaagctgatctaatgcatgatcgagaatgggatgatgagaagagaatgaga gcagatcagaagcggagacatcggaaataa

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