Sutcliffiella horikoshii: B4U37_00625
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Entry
B4U37_00625 CDS
T04904
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bhk
Sutcliffiella horikoshii
Pathway
bhk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bhk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B4U37_00625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhk03021
]
B4U37_00625
03400 DNA repair and recombination proteins [BR:
bhk03400
]
B4U37_00625
Enzymes [BR:
bhk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B4U37_00625
Transcription machinery [BR:
bhk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B4U37_00625
DNA repair and recombination proteins [BR:
bhk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B4U37_00625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
ART74663
UniProt:
A0A1Y0CH98
LinkDB
All DBs
Position
124451..128047
Genome browser
AA seq
1198 aa
AA seq
DB search
MLDVNNFEYMKIGLASPDKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTETGDTPLEKKQLLSEKEFRAYREKYGQTFQAAMGAEAIKKLLF
DIDLEKEVDTLKEELKTAQGQRRTRAIKRLEVLESFRGSGNEPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVERGLAHNIKSAKRKIERVQPEVWDVLESVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERENAVGEGMVFKDTNEALIAYSNGYVHLHTRVAVY
AGSLNNETFTEEQKQKLLITTVGKLIFNEILPPSFPYINEPTKFNLEVNTPEKYFVEKGA
NVKEAIQAQELIDPFKKKILGNIIAEVFKRFKITQTSEMLDRMKNLGFRYSTKAGITVGV
ADIVVLKEKDEILVEAQTKVDTVLKQFRRGLITEEERYDRVISIWSAAKDKIQGLLMESL
PRLNHIFMMSDSGARGNASNFTQLAGMRGLMANPSGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVREIDCGTDRGLHITALKDGTEVVEKLE
ERLIGRYARKAVKHPETGEVLVAGNDLITEDLATTIVEAGVEDVWIRSVFTCDTRHGVCK
KCYGRNLATGLEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAVISEIDGVVTSINEGRDRQQEITVQGEVETRNYTVPYTGRLKVGVNSEVLR
GQELTEGSIDPKELLKVKDMVSVQEYLLLEVQKVYRMQGVEIGDKHVEVMVRQMLRKVRV
IDAGDTDVLPGTLLDVHQFTDANERVLLEGRTPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMNRYRKFDLTKEVGKEEPVTVE
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatgttaataattttgaatatatgaaaataggccttgcttcacccgacaagatc
agatcctggtctttcggggaagtcaagaagcctgagacaattaactatcgtacattaaag
ccagaaaaagatgggttattctgcgaaagaattttcggtcctacaaaggactgggaatgt
cactgtggtaaatacaagcgcgtccgttataagggcgttgtctgtgaccgctgtggtgta
gaagtaacaagagcgaaagtacgtcgtgagcgcatgggtcatatcgaacttgctgctcct
gtatcccacatctggtacttcaaaggaatccctagccgcatgggtcttgttcttgacatg
tccccacgtgcgcttgaggaagtaatttattttgcatcttacgttgtaacagaaacaggc
gatactcctttggagaagaagcaactgctttctgaaaaggaattccgtgcataccgtgaa
aagtatggtcaaacattccaagcagccatgggtgcagaagcaatcaagaaacttcttttt
gacatcgacctagaaaaagaagtagatacgctaaaagaagagctaaaaactgctcaaggt
caacgccgtacaagagcaattaagcgtctggaagtattggaatccttcagaggatccggc
aatgaaccatcttggatgatccttgatgtgctaccggttatccctcctgaattacgtcca
atggttcaattggacggtggtcgttttgcgacttccgacttaaatgacttgtatcgccgt
gtaatcaaccgtaacaaccgtttaaaacgccttcttgaccttggtgctccaagcatcatc
gtacagaacgaaaaacgtatgttacaagaagctgttgacgcacttatcgacaatggtcgc
cgtggccgtccggtaacaggacctggtaaccgtccattgaaatctctttctcatatgctg
aaagggaagcaaggtcgtttccgtcagaacttactaggaaaacgtgttgactactctggt
cgttccgttatcgtagtaggacctaacctgaaaatgtatcaatgtggattaccgaaagaa
atggcccttgagctattcaagcctttcgtcatgaaagaacttgtagaacgcgggcttgca
cataacattaagagtgcgaagcgtaagatcgaacgcgtacaaccagaggtttgggacgta
ttggaatccgttatcagggaacatccggtattactaaaccgcgcaccaactctacacaga
ctaggtattcaagcatttgaacctacacttgtagaaggccgtgctatccgccttcaccca
cttgtatgtactgcatacaacgcggactttgacggagaccaaatggctgttcacgtacct
ctttctgctgaagcacaggctgaagcacgcatcttgatgcttgctgcacaaaacatcctt
aaccctaaggatggaaaacctgtagtaacaccttcccaggatatggtacttggtaactac
tacttaacactagagcgagaaaatgctgtaggtgaaggaatggtgtttaaggatacgaat
gaagcgcttatcgcttattcaaacggctatgtacatctgcacactcgtgtagcggtatat
gcaggatccttaaataacgaaacattcactgaagagcaaaaacaaaagcttctcattacg
acagtaggaaagttgattttcaacgaaatcctgccgccgtcattcccttacattaacgaa
ccgacaaagttcaacttagaagtaaacactcctgaaaagtactttgtggaaaaaggtgcg
aatgtaaaagaagcgatacaagcacaagaattaattgatccatttaagaagaaaatcctt
ggtaacatcattgctgaagtgttcaaacgcttcaagatcacgcaaacatccgaaatgctt
gaccgcatgaaaaaccttggattccgttactctactaaagctggtatcacagttggtgta
gcagatatcgtagttcttaaagagaaagatgaaatcttggttgaagcacaaacaaaagtt
gatacagttcttaagcagttccgccgtggtttgatcacagaggaagaacgttatgaccgc
gttatctccatctggagtgctgcgaaagacaagatccaagggttgctaatggagtccttg
ccacgcctgaaccacatcttcatgatgagtgattccggtgcccgtggtaacgcatctaac
tttacacagttagcgggtatgcgtggactaatggccaatccatctggacgtatcattgaa
ttaccgatcaaatccagtttccgtgaaggtcttacggtattggaatactttatctctact
catggtgcgcgtaaaggtcttgccgatacagcactgaaaactgccgattccggttacttg
actcgtcgacttgtagacgtggcacaagatgttatcgttcgtgagatagattgtggaaca
gaccgtggtctacacatcactgctctgaaagatggcacagaagtagtagagaaattagaa
gaacgtttaatcggccgttatgcaagaaaagctgtgaagcaccctgaaactggggaagtt
cttgttgcgggtaacgatttaattactgaagaccttgctacaaccattgtagaagcaggc
gtggaagatgtttggatccgctctgtatttacatgtgacactcgtcatggtgtatgtaaa
aaatgttacggccgcaaccttgcgactggcttagaagtagaagtgggagaagcagttggt
attattgctgcccaatctatcggtgagccgggaactcagttgacgatgcgtacattccat
acaggtggggttgcaggagacgatattacacaaggtttaccgcgtatccaagagatcttc
gaagcgcgtaatcctaaaggtcaagcggtcatctctgaaattgatggtgttgttacttcc
atcaacgaaggtcgcgatcgtcagcaagaaatcactgtccaaggtgaagtggaaacgaga
aactacacagtaccatacactggccgccttaaagtaggcgtaaattcagaagtattacgt
ggtcaggaactaacagaaggttccatcgatccgaaagaactactgaaagtcaaagatatg
gtatctgtacaggagtatctattgcttgaagttcaaaaagtataccgtatgcaaggggta
gaaatcggtgacaagcacgtagaggttatggttcgccagatgctacgtaaggtacgtgtt
attgatgctggtgatacagatgtactaccaggaacactgcttgatgttcaccaattcact
gatgcaaacgagcgtgtccttcttgaaggcagaacacctgcaactggacgtccggtatta
ctaggtatcacaaaagcttctcttgaaacggattccttcttatctgcagcttccttccag
gaaacgactagagtccttacagacgctgcgattaaaggaaaacgcgacgagttactaggt
ctgaaagagaatgttatcatcggtaaactagttccagctggtacaggtatgaaccgctac
cgcaaattcgatctaacgaaagaagtcggtaaagaagaacctgtaacggtagaataa
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integrated database retrieval system
