Sutcliffiella horikoshii: B4U37_01400
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Entry
B4U37_01400 CDS
T04904
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bhk
Sutcliffiella horikoshii
Pathway
bhk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B4U37_01400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhk03019
]
B4U37_01400
03009 Ribosome biogenesis [BR:
bhk03009
]
B4U37_01400
Enzymes [BR:
bhk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B4U37_01400
Messenger RNA biogenesis [BR:
bhk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B4U37_01400
Ribosome biogenesis [BR:
bhk03009
]
Prokaryotic type
rRNA helicases
B4U37_01400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
GRP
CMS1
AAA_22
NABP
Motif
Other DBs
NCBI-ProteinID:
ART78497
LinkDB
All DBs
Position
266843..268318
Genome browser
AA seq
491 aa
AA seq
DB search
MKSIDRMGFEEATPIQSETIPVALTGKDVIGQAQTGTGKTIAFGLPLLENVDVTNESIQG
IVIAPTRELAIQVAEEIYKASYHKRARVLSVFGGQDISRQIRSLKKNPHIVVGTPGRLLD
HINRKTLRLQNVNTVVLDEADEMLNMGFIEDIEKILAETPEKKQTLLFSATMPAPIRAIA
ERFMSEPVNVKVQAKELTISNIQQFYVEVPEKKKFDTLTRLLDIQSPELAIIFGRTKRRV
DELSDALNVRGYSAEGIHGDLSQAKRMSVLRKFKEGSIDVLVATDVAARGLDISGVTHVY
NFDIPQDPESYVHRIGRTGRAGKSGLAITFVSPREVSYLHHVERVTKRKMDKLKAPTLDE
ALEGQQKMSMEKLTQAVEAKNLGFYRNAAEQLLEEHDAVTLVSAALKLFTKEPDETPIRL
TEEAPMHSRRGGGGRGGDRNRGGGKSSSGGGKGGWNKRSDSRGGKPGGGSGSRDASAKRQ
GYKRSSRKERV
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcgatcgacagaatggggtttgaagaagctacccctatccaatcggaaacgatt
cctgttgcattaactggtaaagatgttatcggtcaagctcaaacaggtacaggtaaaacg
attgcatttggtcttccattgcttgaaaatgtagatgtgacaaacgaatccattcaaggt
atcgttatcgcaccaactcgtgaattagctatccaggttgctgaagaaatttataaagct
tcttaccataaacgtgctcgtgttctttccgtattcggaggccaggacatcagcagacag
attcgttcattgaaaaagaacccgcacatcgtagttggtactccaggtcgtttacttgac
catatcaaccgtaagactcttcgtcttcaaaatgtgaacacggttgttcttgatgaggca
gatgaaatgctgaacatgggattcatcgaggatatcgaaaaaatccttgctgaaacacca
gaaaagaaacaaacattacttttctctgctacaatgcctgcaccaatccgtgcaatcgct
gagcgtttcatgagcgagcctgtaaatgtaaaggtacaagcgaaagaactaacaatatcc
aacatccaacaattctacgtggaagttccggaaaagaagaagttcgacacattgactcgt
cttcttgacatccaatctccagaacttgctatcatcttcggtcgtacaaagcgtcgtgta
gatgagctatctgacgcattgaacgtgcgcggatactctgcagaaggaatccacggtgac
ctttctcaagcgaagcgtatgagcgtacttcgcaagtttaaagaaggatccatcgatgta
cttgttgcaacagacgtagcagctcgtggccttgacatctctggtgttacacacgtttac
aacttcgacatcccacaagatcctgaaagctatgttcaccgtattggacgtacaggtcgt
gctggtaagagcggattggcgatcacattcgttagccctcgtgaagttagctacttgcac
catgtagaacgtgtaacaaaacgtaaaatggacaaattgaaggcaccaactctagacgaa
gcactagaaggccaacaaaaaatgtccatggagaaattaacgcaagctgttgaagcgaaa
aaccttggtttctaccgcaatgcagcggaacaattattagaagagcacgatgcagtaacg
cttgtatctgcagctctgaaattgttcacaaaagagccggacgaaactccaatccgtctt
actgaagaagctccaatgcactcaagaagaggtggtggtggccgtggcggcgaccgtaac
cgtggtggcggaaagagctctagcggcggtggaaaaggcggctggaacaaacgctccgac
agccgtggcggcaagccaggcggcggttctggttcaagggacgcaagcgcaaagcgccaa
ggctacaaacgttcttctcgtaaagagcgcgtataa
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