Sutcliffiella horikoshii: B4U37_09905
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Entry
B4U37_09905 CDS
T04904
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bhk
Sutcliffiella horikoshii
Brite
KEGG Orthology (KO) [BR:
bhk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhk03032
]
B4U37_09905
03400 DNA repair and recombination proteins [BR:
bhk03400
]
B4U37_09905
Enzymes [BR:
bhk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
B4U37_09905
DNA replication proteins [BR:
bhk03032
]
Prokaryotic type
DNA Topoisomerases
B4U37_09905
DNA repair and recombination proteins [BR:
bhk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B4U37_09905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ART76334
UniProt:
A0A1Y0CMM5
LinkDB
All DBs
Position
1914889..1916967
Genome browser
AA seq
692 aa
AA seq
DB search
MADYLVIVESPAKAKTIERYLGKKYKVKASMGHVRDLPKSQMGVNVDHEFEPKYITIRGK
GPVLKELKTAAKKAKKIFLAADPDREGEAIAWHLAHSLDIDITSDCRVVFNEITKDAIKE
SFKHPRPINLDVVDAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSVAVRLVIEREQ
EINAFEPEEYWSIKSSFLTGKSKEFEASFYGVDGKKTELKSEADVNEILGRLEGNSFEIK
SVTKKERKRNPALPFITSSLQQEAARKLNFRAKKTMMMAQQLYEGIELGKEGTVGLITYM
RTDSTRISETAKKEAVEYIEKTYGKQFVSNEERKETKKSNAQDAHEAIRPTSTTKDPQSI
KEYLSRDQFRLYKLIWERFVASQMAPAILDTVSVDLTQNDVQFRATGSTVKFAGFMKVYV
EGNDDQQEEKENLLPPLEKGDTVFSKDIDQKQHFTQPPPRYTEARLVRALEELGIGRPST
YAPTLDTIQKRGYVALDNKRFVPTELGQIVIQLILEFFPEIINVEFTADLETNLDNVEDG
KVNWVNIIDGFYHEFAKRLEKAEAEMQEIEIKDEPAGEDCELCGHEMVFKMGRYGKFMAC
SNFPDCRNTKPIVKDIGVPCPKCEKGNIVERKSKKKRIFYGCDQYPTCEFLSWDKPIARK
CPKCESLLVEKKLKKGVQVQCVECDYKEEPQG
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatttagtgattgtggaatcaccagcaaaagcgaagacaattgaacgatat
ttaggaaaaaaatataaagtgaaagcctccatggggcatgtaagagacttacctaaaagt
caaatgggtgtaaatgtagaccatgaatttgagcctaaatatataaccatcagagggaaa
ggtcccgtcttgaaggaattaaaaacagctgcaaaaaaagcaaagaaaatttttctcgcg
gctgacccggatcgcgaaggggaagctatcgcatggcatcttgctcacagtcttgatatt
gatatcacatctgattgtcgggtggtttttaatgaaataacaaaagatgcaataaaggaa
tcattcaaacatccaagaccgatcaatcttgatgtagtggacgcacaacaggcaagaagg
atcttggatcgacttgtgggctacaatataagccctttattatggaagaaagtgaaaaaa
ggattaagtgcaggacgcgttcaatccgttgcggttcggttagttattgaacgagagcaa
gagataaatgcatttgaaccggaagagtactggtccataaaaagcagtttcctgacagga
aaatcaaaagaatttgaagcaagcttctatggcgtagatggaaagaagacagagcttaaa
tctgaagcggatgtcaatgagattcttggaaggcttgagggcaactcttttgaaattaag
agtgtaaccaaaaaagagcgtaaacgtaatccagcgcttccttttatcacatcctccttg
caacaggaagcagcgcgtaaacttaacttccgtgcaaagaaaacgatgatgatggctcag
cagctctatgagggcattgagcttggaaaagaaggtacggtcggtcttatcacctatatg
cgtacggattcaactcgtatttcagaaaccgcaaaaaaagaagcggtggaatatatcgaa
aagacatatggcaaacaatttgtttctaatgaagaaagaaaagagacaaaaaagagcaat
gcacaggatgcccatgaagcgattcgtccgacatcaaccacgaaggaccctcagtcgatc
aaagaatatttatcacgcgatcaattccgtttgtataaattgatttgggagcggtttgtt
gcgagtcagatggcacctgcaattttggatacggtcagtgtggacttaacgcaaaatgat
gttcaattccgtgcgaccggttccacggtcaagttcgccggtttcatgaaagtatatgtg
gaaggtaatgacgatcaacaggaagaaaaagaaaacctgttgcctcctttagagaaaggt
gatacagtcttctccaaagatatcgatcaaaagcaacatttcacacaacccccaccaagg
tacacagaggcaaggctggtacgtgcccttgaagagttgggaataggaagaccgtccaca
tatgctcctacactggatactatccagaaaagaggctatgtagcgcttgataacaaaaga
tttgttccaacagagcttgggcagattgtcattcaattgattttggagttcttcccggaa
atcatcaatgtcgaatttacagcagatcttgaaacgaacctggataatgtggaagatggt
aaagtaaattgggtaaatatcattgacggcttttatcatgaatttgccaagcgtttagaa
aaagcggaagcggaaatgcaggaaatagaaataaaagatgaacctgcaggtgaagattgt
gagctttgcggtcacgaaatggtctttaaaatgggtaggtatggaaagttcatggcgtgc
tccaatttccctgactgccgcaatacaaaacctatcgtaaaagatatcggcgtcccttgt
cctaaatgtgaaaaagggaatatcgtcgaaagaaaaagtaaaaagaaacgaattttctat
ggttgtgaccaataccctacttgtgaatttctatcctgggataagcctattgccagaaaa
tgtccgaagtgtgaatccttactggtcgagaaaaagcttaaaaaaggtgtacaggttcag
tgcgtagagtgcgattataaagaagaaccacaaggataa
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