Sutcliffiella horikoshii: B4U37_15010
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Entry
B4U37_15010 CDS
T04904
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bhk
Sutcliffiella horikoshii
Pathway
bhk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B4U37_15010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhk03019
]
B4U37_15010
Messenger RNA biogenesis [BR:
bhk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B4U37_15010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
ODP
Motif
Other DBs
NCBI-ProteinID:
ART77276
UniProt:
A0ABM6KLE3
LinkDB
All DBs
Position
2891380..2893056
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AA seq
558 aa
AA seq
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MKKINETNISIFALGGLGEIGKNTYVIKYQDEIIIIDAGIKFPTDELFGIDYVIPDYSYL
IQNKEKIKGIFITHGHEDHIGGIPYLLKEIDAPIYAGRLALELIKERLKEHGLLKKARLV
EIEEDKLVSFEYLAVDFFRTTHSIPDSYGICVKTPYGNIVHTGDFKFDLTPIGPLTNMSK
IADIGKEGVLCLLSDSTNSEIPGFSLSENEISRTIHELFSQVDGRIIFATFASNMYRFKQ
AIEAAVLHNRKIVVLGRSLLRAVRIGTELGYLKIPKESLIEASAVNDYPDDQILVICTGS
QGEPFAALSRIAYNKHPQLSVRKKDTVIFSSSPIPGNTLSINRIIDQLSRAGASVLHHKL
KKIHTSGHGAQEELKLMISLLKPNFFVPIHGEYKMLKKHVSLAEECGVPLEKSFIMDNGT
ILELNENEASITGTVPANAIYVDGDGIGDIGTIVLRDRKIFSESGILLVVVAIDFREKKI
ISGPQVISRGFVFIRESEQLMGKLRDIAHTATTQSLESGNRRWSDVRSDILDQVEPYIYK
ITKRRPMILPILMDVSKR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaattaatgaaaccaacatttctatttttgcccttggcggattaggggaaata
ggcaaaaatacatatgtcattaaatatcaggatgaaataattatcatagatgctggtatt
aaattccccacagatgaactttttggaattgattatgttataccggattactcctatctt
atccaaaacaaagaaaaaattaaaggaatattcatcacccacggtcatgaagatcatatt
ggaggcatcccctacttactgaaagaaatagatgcccctatctatgcaggaagacttgct
ctagaactaatcaaagaacgattaaaagaacatggactgttaaaaaaagctaggttagtt
gaaattgaggaagacaaacttgtttcctttgaatatttagcggtagactttttcaggacc
actcacagcattccagattcatatgggatttgtgtaaaaacaccttacggcaatattgtt
catactggggatttcaaattcgacttgactcctattggtcctttaacgaacatgtcaaag
atagcagatataggaaaagagggcgtcctatgccttctatcagatagtacgaacagtgaa
ataccaggcttttctttatcagaaaatgagataagcaggacgattcacgagttattcagt
caagttgacggaagaattatttttgcaacatttgcatcaaatatgtatcgctttaaacaa
gcaattgaagcggctgttttacataacagaaaaattgttgtacttggaagaagtctactg
agggcagtaaggattggtacggagcttggctatttaaagattccaaaggagtcactcata
gaagcttccgctgttaacgattatccagatgatcagatacttgtaatttgtactggaagt
caaggcgagccctttgccgcactttccaggattgcttataataaacatccacaactatct
gtccgtaaaaaggataccgttatcttttcatcttcccctattccaggaaatacactaagt
atcaatcgaatcattgatcagcttagtagggctggggcaagcgtgctgcatcacaaactt
aaaaagattcacacatccggtcacggtgcacaagaagaattaaagctgatgatcagttta
ttaaaacctaacttctttgtaccgattcacggggaatataaaatgctgaaaaagcatgtg
agcttggcagaggaatgcggcgtaccgcttgagaaatccttcatcatggataacggtaca
atcttagaactaaatgagaatgaagcgagtattacaggtactgttcccgctaatgctatt
tatgtggacggagacggtattggagacatcgggaccattgttttaagggatagaaaaata
ttttctgaatcaggtattttactggtagtagtggcaattgatttccgggagaagaaaatc
atatctggtcctcaagtcatttcgagaggctttgtttttataagggaatccgaacagtta
atgggtaaattacgagatattgcccatacagcaacgacacaatcacttgaatctggtaat
agaagatggagcgacgtcaggtccgatattcttgatcaggtggaaccttatatctataag
ataacaaagcgccgtccaatgattcttccaattttaatggacgtgtcaaaaagataa
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