KEGG   Sutcliffiella horikoshii: B4U37_15010
Entry
B4U37_15010       CDS       T04904                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
bhk  Sutcliffiella horikoshii
Pathway
bhk03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bhk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B4U37_15010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bhk03019]
    B4U37_15010
Messenger RNA biogenesis [BR:bhk03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     B4U37_15010
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 ODP
Other DBs
NCBI-ProteinID: ART77276
UniProt: A0ABM6KLE3
LinkDB
Position
2891380..2893056
AA seq 558 aa
MKKINETNISIFALGGLGEIGKNTYVIKYQDEIIIIDAGIKFPTDELFGIDYVIPDYSYL
IQNKEKIKGIFITHGHEDHIGGIPYLLKEIDAPIYAGRLALELIKERLKEHGLLKKARLV
EIEEDKLVSFEYLAVDFFRTTHSIPDSYGICVKTPYGNIVHTGDFKFDLTPIGPLTNMSK
IADIGKEGVLCLLSDSTNSEIPGFSLSENEISRTIHELFSQVDGRIIFATFASNMYRFKQ
AIEAAVLHNRKIVVLGRSLLRAVRIGTELGYLKIPKESLIEASAVNDYPDDQILVICTGS
QGEPFAALSRIAYNKHPQLSVRKKDTVIFSSSPIPGNTLSINRIIDQLSRAGASVLHHKL
KKIHTSGHGAQEELKLMISLLKPNFFVPIHGEYKMLKKHVSLAEECGVPLEKSFIMDNGT
ILELNENEASITGTVPANAIYVDGDGIGDIGTIVLRDRKIFSESGILLVVVAIDFREKKI
ISGPQVISRGFVFIRESEQLMGKLRDIAHTATTQSLESGNRRWSDVRSDILDQVEPYIYK
ITKRRPMILPILMDVSKR
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgaaaaaaattaatgaaaccaacatttctatttttgcccttggcggattaggggaaata
ggcaaaaatacatatgtcattaaatatcaggatgaaataattatcatagatgctggtatt
aaattccccacagatgaactttttggaattgattatgttataccggattactcctatctt
atccaaaacaaagaaaaaattaaaggaatattcatcacccacggtcatgaagatcatatt
ggaggcatcccctacttactgaaagaaatagatgcccctatctatgcaggaagacttgct
ctagaactaatcaaagaacgattaaaagaacatggactgttaaaaaaagctaggttagtt
gaaattgaggaagacaaacttgtttcctttgaatatttagcggtagactttttcaggacc
actcacagcattccagattcatatgggatttgtgtaaaaacaccttacggcaatattgtt
catactggggatttcaaattcgacttgactcctattggtcctttaacgaacatgtcaaag
atagcagatataggaaaagagggcgtcctatgccttctatcagatagtacgaacagtgaa
ataccaggcttttctttatcagaaaatgagataagcaggacgattcacgagttattcagt
caagttgacggaagaattatttttgcaacatttgcatcaaatatgtatcgctttaaacaa
gcaattgaagcggctgttttacataacagaaaaattgttgtacttggaagaagtctactg
agggcagtaaggattggtacggagcttggctatttaaagattccaaaggagtcactcata
gaagcttccgctgttaacgattatccagatgatcagatacttgtaatttgtactggaagt
caaggcgagccctttgccgcactttccaggattgcttataataaacatccacaactatct
gtccgtaaaaaggataccgttatcttttcatcttcccctattccaggaaatacactaagt
atcaatcgaatcattgatcagcttagtagggctggggcaagcgtgctgcatcacaaactt
aaaaagattcacacatccggtcacggtgcacaagaagaattaaagctgatgatcagttta
ttaaaacctaacttctttgtaccgattcacggggaatataaaatgctgaaaaagcatgtg
agcttggcagaggaatgcggcgtaccgcttgagaaatccttcatcatggataacggtaca
atcttagaactaaatgagaatgaagcgagtattacaggtactgttcccgctaatgctatt
tatgtggacggagacggtattggagacatcgggaccattgttttaagggatagaaaaata
ttttctgaatcaggtattttactggtagtagtggcaattgatttccgggagaagaaaatc
atatctggtcctcaagtcatttcgagaggctttgtttttataagggaatccgaacagtta
atgggtaaattacgagatattgcccatacagcaacgacacaatcacttgaatctggtaat
agaagatggagcgacgtcaggtccgatattcttgatcaggtggaaccttatatctataag
ataacaaagcgccgtccaatgattcttccaattttaatggacgtgtcaaaaagataa

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