Sutcliffiella horikoshii: B4U37_16570
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Entry
B4U37_16570 CDS
T04904
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bhk
Sutcliffiella horikoshii
Pathway
bhk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bhk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B4U37_16570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhk03400
]
B4U37_16570
Enzymes [BR:
bhk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
B4U37_16570
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
B4U37_16570
DNA repair and recombination proteins [BR:
bhk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B4U37_16570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_8
NFACT_N
DUF1894
Zn_ribbon_IS1595
Zn_Tnp_IS91
DUF4379
HypA
Motif
Other DBs
NCBI-ProteinID:
ART77568
UniProt:
A0A1Y0CQR3
LinkDB
All DBs
Position
complement(3226195..3227031)
Genome browser
AA seq
278 aa
AA seq
DB search
MPELPEVETVRKTLVELVQGKTIKQVKVLWPKMIKEPDDAALFEEMLIGQEIVKIGRRGK
FLLFYLTDYCMVSHLRMEGKYGLFQKEEPANKHTHVFFYFEDGTELRYQDVRKFGTLHLY
KKGEELAAKSLASLGPEPFEDEFNLDLLKERLAKTNRNIKAVLLDQTVVVGLGNIYVDEA
LFRAGIHPERISSSLNEKELIELQREIVLTLQEAVDKGGSTIRSYVNSQGQIGMFQLELF
VYGRKGEPCRKCGHEIEKTVVAGRGTHTCPQCQPKPLE
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacttcctgaggttgaaacggtcagaaaaacactggtcgagcttgtacaaggg
aaaacaatcaaacaggtgaaagtcttatggcccaaaatgattaaagagccggatgatgcc
gctctttttgaggaaatgctcattgggcaggaaattgtgaaaatcggaagaagggggaaa
tttcttctcttctaccttaccgattattgcatggtttctcatttgcgaatggagggcaaa
tatggcctctttcagaaagaggagccggcaaataaacatacccacgtgttcttctatttt
gaggacggcaccgaacttcgctaccaggatgttcgcaagttcggtacgcttcatctttat
aaaaaaggagaggaacttgcagccaaatcgcttgcaagtctgggacctgaaccatttgag
gatgagttcaaccttgatcttcttaaagaaagacttgccaaaacaaaccggaatatcaaa
gcagtcctattagatcaaacagttgttgtgggcttaggtaatatatacgtggatgaggcg
ttattcagagcgggtattcatcctgagagaatctcaagcagtttaaatgaaaaagagctg
atagagctgcaacgcgaaatagtcctgactcttcaagaagctgtcgacaaaggtggaagt
acaatccgttcctatgtaaactctcaaggtcaaatcggcatgttccagctcgagcttttc
gtctacggccgtaaaggagagccttgcagaaaatgtggccatgaaatcgaaaaaacagtc
gtagccggcagaggcacccacacctgcccccaatgccagccaaaaccattagagtaa
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