Sutcliffiella horikoshii: B4U37_19030
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Entry
B4U37_19030 CDS
T04904
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
bhk
Sutcliffiella horikoshii
Pathway
bhk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bhk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B4U37_19030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhk03400
]
B4U37_19030
DNA repair and recombination proteins [BR:
bhk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B4U37_19030
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B4U37_19030
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_21
AAA_16
AAA_29
RsgA_GTPase
AAA_22
nSTAND1
nSTAND3
AAA_33
APS_kinase
AAA_25
BCA_ABC_TP_C
DnaJ_CXXCXGXG
AAA_18
nSTAND6
NACHT
Viral_helicase1
MMR_HSR1
NB-ARC
cobW
MeaB
Dynamin_N
Septin
IIGP
NTPase_1
DUF463
DUF87
Motif
Other DBs
NCBI-ProteinID:
ART77999
UniProt:
A0ABM6KNQ2
LinkDB
All DBs
Position
complement(3708256..3711132)
Genome browser
AA seq
958 aa
AA seq
DB search
MAMDKIVVKGARAHNLKNIDVTIPRDKLVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDAIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARVGRP
TCPKHGIEISSQTIEQMVDRIMEYPERTKLQILAPVIQGRKGTHVKTLEDIKKQGYVRVR
VNGEMMEISDDIELEKNKKHSIEVVIDRIVVKEGVETRLSDSLESALRLGEGKVIVDVIG
EEELLFSEHHACPQCGFSIGELEPRMFSFNSPYGACQKCDGLGTKLEVDIDLVMPNKNLS
LKEHALAPWEPTSSQYYPQMLQAVCNHFGIDMDVPVKDIPKNLLDKVLYGSGKEEIYFRY
ENDFGQVRESYIIFEGVIPNVERRYKETSSDYIREQMEKYMAQQPCPACKGNRLKLESLS
VLINNRHIGNVTNFSIVEALDFFDSLELTEKEKKIAHMILREIEERLGFLNNVGLDYLTM
SRSAGTLSGGEAQRIRLATQIGSRLTGVLYILDEPSIGLHQRDNDRLIQTLKNMRDIGNT
LIVVEHDEDTMMAADYLLDIGPGAGVHGGQVISAGTPEEVMNDESSLTGQYLSGKKFIPL
PTERKVVKDRFIEVIGANENNLSNVDVKIPLGCFVAVTGVSGSGKSTLINEILHKALAQR
LHNAKTKPGLHKEIRGIDHLDKVIDIDQSPIGRTPRSNPATYTGVFDDIRDVFASTNEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVQYKG
KNIDDILKMTVEDAVSFFENIPKIKRKLQTIYDVGLGYITLGQPATTLSGGEAQRVKLAS
ELHRRSTGRSLYILDEPTTGLHVDDISRLLKVLQRLVENGDTVLVIEHNLDVIKAVDYMV
DLGPEGGDKGGSIIATGTPEEVIEIEASYTGQYLRPVLLRDRDRMNQKVKKVEAVSKG
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggataaaatagtggtaaaaggggccagagcccataacttaaaaaacatagat
gtaacaattccccgcgataaattagtggtgttaacagggctgtcaggatcggggaaatcc
tctcttgcctttgacaccatctatgcggaaggtcagcgccgatatgtggagtccctttct
gcctatgcgcgccaattccttgggcagatggacaaaccggatgtggatgcgattgaagga
ctctcacctgccatctccatcgaccagaagacgacaagccgaaatcctcgttctactgtt
ggaacggtaacagaaatctacgattatctacgtcttcttttcgcacgggtaggcagaccg
acatgtccgaagcatggtattgagatttcctctcaaaccattgaacaaatggtagaccgg
atcatggagtacccggaacggaccaaacttcaaattcttgcgccggtgatccaaggccgc
aaaggaacgcatgtgaaaacacttgaggatataaaaaagcaaggatatgtgcgtgtgcgt
gtgaacggtgaaatgatggaaatctccgacgatattgagttagaaaagaacaaaaagcat
tccatcgaagtagtgatagaccgcattgtggtaaaagaaggcgtggaaacccgtctgtcc
gattcattggaatctgctcttagacttggggaagggaaagtaattgtggacgtaattgga
gaagaggaacttctcttcagcgagcatcatgcttgtccacaatgtggattctccataggt
gaactagaaccaagaatgttctctttcaacagtccttatggggcttgtcaaaagtgtgat
gggctgggtacgaaactggaagtggacattgatttggtgatgccgaacaagaacctcagc
ctcaaagagcacgcccttgcaccttgggagccgacaagttcacaatattatccacaaatg
ctgcaagcggtttgtaatcactttggcattgacatggatgtacctgtgaaagatatcccc
aagaatcttttggataaagtcctttatggcagtgggaaagaagaaatttacttccgctat
gaaaacgactttggacaagtgcgggaaagctacatcatctttgaaggagttatccccaat
gtggaaagacgctacaaggagacaagctcggattacatccgtgaacagatggaaaagtat
atggcgcagcaaccatgtcctgcttgtaaggggaaccgtttgaagttagaaagcttatcg
gtgcttatcaacaataggcatatcggaaatgtgactaacttttccattgtcgaagcattg
gacttctttgatagccttgagctgacggagaaagaaaaaaagattgcccatatgattctt
cgtgagattgaggaacgtctaggtttcttgaataatgtcgggcttgattatttgacgatg
agtcgttctgccgggacgctttcaggtggagaggcgcaacggattcgtcttgccacccaa
atcggctccagattgacaggagttctgtatattctcgatgagccatctatcggacttcat
cagcgcgataatgaccgactcattcagacgctcaaaaacatgcgcgatatcggcaacacg
ttaattgtcgtggagcatgatgaagataccatgatggcagcggactacttgcttgatatc
ggacctggagcgggtgtgcatggaggtcaggtcatttcagctggtacacctgaggaagtg
atgaacgatgagagctccttgacaggtcaatatctctcaggtaagaaattcattccactc
ccgacagaaagaaaagtcgtcaaggaccgtttcattgaagtcatcggtgcgaacgaaaat
aacttgagtaatgtggatgtaaaaattccgcttggctgttttgtggctgttacaggggtg
tcaggatcagggaaaagtacgttgatcaacgaaattttgcataaggctcttgcccaacgt
ttgcataatgcgaaaaccaaacctggactgcataaagagatccgagggattgaccatctt
gataaagtaattgatatcgatcagtccccgattggaagaacgccacgttcgaaccctgcg
acatataccggagtatttgatgatatccgtgacgtatttgcatctaccaatgaagcaaaa
gttcgtggttataagaaaggtcgtttttcgttcaatgtgaaaggcggacgctgtgaggcg
tgtcgaggggacggaattattaaaatcgaaatgcatttccttcctgatgtgtatgtgcca
tgtgaagtgtgtcatgggaaacgttataaccgtgaaacgcttgaagtacagtataaagga
aagaatatagatgatattttgaagatgaccgttgaggatgcggtgagcttctttgaaaac
attccaaaaatcaagcggaagctgcagactatatatgatgtgggcttaggttatattacg
cttggtcagcctgcgaccactttatctggtggagaagcgcaacgtgtcaaacttgcatca
gaattgcatcgtagatctacaggtcgttccctttatatcttggatgaaccgacaactggc
ttacatgtggatgacatctcgagattgttgaaagttctacaacgattagtagagaatggg
gataccgtactggttattgaacataacttagatgttattaaagcagtggattacatggtc
gaccttggtcctgaaggtggagacaaaggcggcagcatcattgcgactggtacacctgaa
gaagttattgaaatagaagcttcttatacggggcaatatcttcgaccagttttactccgt
gaccgtgatcgaatgaatcagaaagtaaagaaggttgaagcggtcagcaaaggatag
DBGET
integrated database retrieval system
