Bacteroides helcogenes: Bache_0028
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Entry
Bache_0028 CDS
T01393
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bhl
Bacteroides helcogenes
Pathway
bhl02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bhl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Bache_0028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhl03021
]
Bache_0028
Transcription machinery [BR:
bhl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Bache_0028
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
HTH_23
Sigma70_ECF
DUF6930
DUF6456
HTH_7
HTH_1
GerE
HTH_24
Vac_ImportDeg
OspF_SpvC
HTH_Tnp_ISL3
HTH_10
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ADV42058
UniProt:
E6SR54
LinkDB
All DBs
Position
35909..36454
Genome browser
AA seq
181 aa
AA seq
DB search
MTEQEVRRYLRQMKEEDSERAFHGFYNLCYDRLFRIAYYYVKHGEWAQEIVLDVFMRLWE
QRAKLPEVNNIEDYCFILTKNASLNYLDKESRHTTQSSDQLPEPSDRANSPEDTLISEEL
FARYVKALDRLPQRCREVFIRVREEKQSYAQVAKELNISVKTVDAQLQKALTRLREMLLS
E
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacaagaagtcagacgatatttacgccaaatgaaggaagaagactcagaaaga
gccttccatggtttctacaatctttgctatgaccgtctgttccgcattgcctactattat
gtgaaacacggagaatgggcacaagaaatagtgctcgatgtgttcatgcgtctttgggag
cagcgtgccaaattacccgaagtgaacaatatagaggattattgctttattctgaccaag
aatgcttccctcaactatctggacaaagaaagcagacataccacacaatcctctgaccaa
cttcccgaaccctccgaccgggctaactctccggaagacacccttataagtgaagaactt
ttcgcccgctacgtcaaagctcttgaccgtctgccccaacgttgccgtgaagtcttcatc
cgtgtccgcgaagagaaacaaagctatgcacaagtagcaaaagaactgaatataagcgta
aagacagtagatgcacaacttcagaaagccctcacaaggctaagggagatgctgctttcc
gaataa
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integrated database retrieval system
