Bacteroides helcogenes: Bache_0071
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Entry
Bache_0071 CDS
T01393
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bhl
Bacteroides helcogenes
Pathway
bhl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bache_0071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhl03019
]
Bache_0071
03400 DNA repair and recombination proteins [BR:
bhl03400
]
Bache_0071
Enzymes [BR:
bhl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bache_0071
Messenger RNA biogenesis [BR:
bhl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bache_0071
DNA repair and recombination proteins [BR:
bhl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Bache_0071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
GMT-wHTH
HTH_11
HTH_Cmi2_C
HTH_20
DUF6026
Glyco_transf_56
Motif
Other DBs
NCBI-ProteinID:
ADV42101
UniProt:
E6SRU2
LinkDB
All DBs
Position
103092..105035
Genome browser
AA seq
647 aa
AA seq
DB search
MNDNHNLTSPLPTGEEMREILKQYWGYDAFRGIQEDIINSIREGKDTLGLMPTGGGKSIT
FQVPALAKDGLCLVITPLIALMKDQVQNLRKRGIKALAIYSGMSRQEIIVTLENCIFGNY
KFLYISPERIDTEIFRTKLQKMKISMITVDESHCISQWGYDFRPAYLKIAGIRDLLPGVP
VLALTATATPEVVKDIQLRLHFREENVFRMSFERKNLAYIIRKTENKTGELLHILHRMTG
SAIIYVRNRRRTKEITELLHNEGITADFYHAGLDDTTKDIRQQRWQTGESRVIVATNAFG
MGIDKPDVRIVIHMDLPDSIEAYFQEAGRAGRDGEKAYAVILYSKSDRTTLHKRIPDTFP
DKNYIKEVYEHLQYYYQMAMGDGQGCIREFNIEDFCRKFKYFPVPVDSALKILTQAGYLE
YTDEQDNASRIYFTIRRDELYKLRETGEETEMLIQTILRSYTGVFTDYTFINEDSLAART
GLTRRQIYERLMHLAKLRIISYIPHKKTPYIIYTRERIEIRHLQIPPHVYEERKERYEKR
IEAMLDYVENDTACRSRKLLRYFGENNEHNCGQCDTCISLRSKEDADRSSTKKITEEILQ
ALSGQTMTPATLAEQIAVDKEALVNALHELLDEGEIITNNGMLQIKK
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgaacgataatcacaacttaacatctcctctccctacaggggaggagatgagggagatt
ctcaaacaatactggggatatgatgccttccgaggcattcaggaagatattatcaacagc
atcagagagggcaaggatactttggggctaatgcccacaggaggtggaaaatccatcact
ttccaggttccggcacttgctaaggacggactatgccttgtaatcactcctctgatcgca
ctgatgaaagaccaggtgcagaacctcaggaaacgtggcataaaagcacttgccatatat
tccggtatgagcagacaggagatcatcgtcaccttggagaactgtattttcggcaactac
aagtttctctacatttctcccgaacgaatagatacggaaatcttccgcaccaaattgcag
aagatgaagatcagcatgatcaccgtcgatgaaagccattgcatctcacaatggggttat
gacttccgtccggcttacctcaaaatagccggaatacgcgatttattgccgggtgtgcct
gtgcttgcactgacagccaccgctaccccggaagtagtgaaggacatacaactccggctt
catttccgtgaagaaaacgtattccgcatgagctttgagcgcaagaaccttgcctacatc
atacgcaaaacggaaaacaagaccggagaactgctacatattctgcaccgcatgaccggt
agtgccatcatatatgtacgcaaccgccgccgtaccaaagaaatcaccgaactgctgcat
aacgaaggcatcacagcagatttctaccatgccggacttgatgacacgaccaaagatata
cgccagcaacgctggcaaacaggcgaaagccgtgtcattgtagcaaccaacgcattcgga
atgggcattgacaaaccagatgtacgtatcgttatacacatggatctaccggattccata
gaagcctacttccaggaggccggacgtgccgggcgtgacggagagaaagcgtatgccgtc
atcctttattccaaatcagacaggacaactctccataaacgcattccagatacctttccc
gataaaaattacatcaaagaagtgtacgaacatctgcaatactactaccagatggcaatg
ggggacgggcaaggttgcatacgcgaattcaacatcgaagatttctgccggaaatttaaa
tattttcccgtcccggtggacagtgccttgaaaatattaacgcaagccgggtatctggaa
tacacggacgagcaggataatgcttcccggatttatttcaccatccgcagagatgagcta
tacaaactccgtgaaacgggcgaagaaacggaaatgcttatccaaaccatattgcgctcc
tacacaggtgtattcaccgactatactttcatcaacgaagattcacttgcagcacgcaca
ggactcacccgaagacagatatacgagcgattgatgcatcttgccaaactgagaatcatc
agttatattccacacaaaaagacaccttatataatatacacacgtgaaaggatcgaaata
cggcatctgcaaatccctcctcatgtatatgaagagcgtaaagagcgttatgaaaaacgc
atcgaagccatgttggattatgtcgaaaatgacaccgcatgccgcagccgcaaactgttg
cgttacttcggagaaaacaatgaacataactgcggacaatgcgacacttgcatcagtctg
aggagcaaagaggatgccgatcgctcttctacaaagaaaattaccgaagaaatacttcaa
gccttgtccggacagactatgacacctgcaaccttggccgaacaaatagctgttgataaa
gaagctcttgtcaatgcactccatgagttactggatgaaggtgaaataattaccaataac
ggaatgctgcaaatcaaaaaataa
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