Bacteroides helcogenes: Bache_0151
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Entry
Bache_0151 CDS
T01393
Name
(GenBank) RNA-binding S4 domain protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
bhl
Bacteroides helcogenes
Brite
KEGG Orthology (KO) [BR:
bhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bhl03009
]
Bache_0151
Enzymes [BR:
bhl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Bache_0151
Ribosome biogenesis [BR:
bhl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Bache_0151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
ThiS
Motif
Other DBs
NCBI-ProteinID:
ADV42181
UniProt:
E6SSK9
LinkDB
All DBs
Position
complement(215226..216731)
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AA seq
501 aa
AA seq
DB search
MSTENETWREASSSEENSGAGRDGNQFDREGGYSRPSYNRESGERPYRPRYSSEGGDRPQ
RPYNSDRPYRPRFNPNAENGDRPQRSYNSDRSYGNSDRPYRPRYNSDNGDRPQRPSYGSN
MGGDRPYRPRYNDDNSDRPQRPYSADRPQRPRFNSEGEDRPQRPYNNDRPYGGDRSYGNS
DRPYRPRYNGENSDRPQRPYGNNAGGDRPYRPHYNSNGGGRSGGYGNRDSYSRPIRRSAD
YDPNAKYSKKKQIEYKEQFVDPNEPIRLNKFLANAGVCSRREADEFITAGVVSVNGEVVT
ELGTKIKRGDEVKFHDQAVSIERKIYVLLNKPKDTVTTSDDPQARRTVMDLVKGACEERI
YPVGRLDRNTTGVLLLTNDGDLASKLTHPKFLKKKIYHVHLDKNLTKSDMEQIAAGIQLD
DGEIHADAISYTDDFKKDDVGIEIHSGKNRIVRRIFESLGYKVVKLDRVYFAGLTKKGLR
RGEWRYLSEAEVNFLRMGSFE
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagaaaacgaaacttggcgtgaagcttcttcctcagaggagaactcaggagcc
ggccgtgatggtaaccagtttgacagagaaggtggatatagccgtccgtcctacaaccgt
gaaagcggcgaacgtccttatcgtccgcgttacagcagtgaaggcggtgatcgtccgcag
cgtccttacaacagcgaccgcccttatcgtccgcgatttaatcctaatgcggaaaatggt
gaccgtccacaacgttcctataatagtgatcgttcgtatggcaacagtgaccgtccttat
cgtccgcgctacaacagtgacaatggtgatcgtccgcaacgtccttcttatggaagtaat
atgggaggtgatcgcccttatcgtccgcgctacaatgatgacaatagcgatcgtccgcaa
cgtccgtacagcgctgatcgtccgcaacgtccgcgttttaatagtgagggcgaagatcgt
ccgcagcgtccttataataatgatcgcccctatggtggcgaccgttcgtatggtaatagt
gaccgtccttaccgtcctcgttataacggtgaaaacagtgaccgtccgcaacgtccttat
ggaaacaatgcaggtggtgatcgtccttatcgtccgcattacaattcgaatggtggtgga
aggtccggcgggtatggtaacagagacagttatagccgtccgattcgtcgttctgccgat
tatgatcctaatgcaaagtatagcaagaagaagcaaattgaatataaagagcaatttgtt
gatcctaatgaaccgattcgtttgaataagttcctggccaatgcaggcgtttgctctcgt
cgtgaagctgatgagttcattacagccggagtagtttccgtaaatggagaagtggttacg
gaattgggtacaaaaattaagcgtggtgatgaagtgaaattccatgatcaggcggtcagt
atcgaacgtaagatttatgtcctattgaataaaccgaaggacacggttactacttctgat
gacccgcaggctcgtcgtaccgtgatggatcttgtgaaaggagcttgtgaagaacgtatt
tatcccgtcggtcgcttggatcgcaataccactggcgtattgttgctgacaaatgatggc
gatctggcttctaaattaacgcaccccaagttcctaaagaagaaaatatatcatgtgcac
ttggataagaatctgacaaaatctgatatggagcagatagcggccggtattcagttggat
gatggcgaaattcatgcagatgctatcagttatacggacgacttcaagaaagatgatgtt
ggcattgagattcattctggtaagaaccgtattgtacgccgtattttcgagtcattggga
tataaggtcgtaaaactggatcgtgtttattttgccggtttaactaagaaaggcttacgt
cgtggtgaatggcgctacctctcggaagcagaggtgaacttcctgcgcatgggatctttt
gagtaa
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