Bacteroides helcogenes: Bache_0276
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Entry
Bache_0276 CDS
T01393
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bhl
Bacteroides helcogenes
Pathway
bhl02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bhl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Bache_0276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhl03021
]
Bache_0276
Transcription machinery [BR:
bhl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Bache_0276
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
HTH_24
HTH_5
HTH_11
Sigma70_ECF
PCI
PhyR_sigma2
UPF0122
HTH_10
RICH
HTH_40
Motif
Other DBs
NCBI-ProteinID:
ADV42306
UniProt:
E6STV3
LinkDB
All DBs
Position
complement(387597..388199)
Genome browser
AA seq
200 aa
AA seq
DB search
MDRACFERIYTDYYKVLRFFAMRVVGDMPHAEDIVQEVFTHCWENREQIDASIPIKSYLY
TLTYRRALDLLKSSQYARKDLSEDVSYLDNLLFTTFTADEQLSTDEIKKEIILCVELLPD
RCKEVFMMSRFQNLKNREIAEKLNITVKAVEKHISKALKDIRAHLLRNGYMPVAAFILSL
PSIITPPPYLIIFNKFRIGK
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggatagagcatgttttgaacgcatatataccgattactataaagttttacgcttcttt
gccatgcgcgtcgtcggcgacatgccgcatgccgaggacattgttcaagaagtttttacc
cactgttgggaaaaccgggaacagatagacgcctccattcctataaaatcctacctgtac
acgttgacctatcgtcgcgcccttgacctgctgaaatcgtcccaatatgcccgaaaagat
ttgtcggaggatgtctcttacctggacaacctgcttttcaccacgttcaccgcagacgag
cagttgagcacggacgagataaagaaagagataatactttgcgtggagctcctgcccgat
aggtgcaaggaggtattcatgatgagtcgttttcaaaaccttaagaaccgcgagatagcc
gaaaagctaaacattacggtgaaagcggtggagaagcacatttcgaaggcgcttaaggat
attcgtgcccatcttttgcggaacggatatatgcctgtggctgctttcatcctttcacta
ccctctattattaccccccccccatatttaattatatttaacaaattccgaatcggaaag
tga
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