Bacteroides helcogenes: Bache_0618
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Entry
Bache_0618 CDS
T01393
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bhl
Bacteroides helcogenes
Pathway
bhl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bache_0618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhl03019
]
Bache_0618
03009 Ribosome biogenesis [BR:
bhl03009
]
Bache_0618
Enzymes [BR:
bhl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Bache_0618
Messenger RNA biogenesis [BR:
bhl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bache_0618
Ribosome biogenesis [BR:
bhl03009
]
Prokaryotic type
rRNA helicases
Bache_0618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ADV42643
UniProt:
E6SMS7
LinkDB
All DBs
Position
843224..845191
Genome browser
AA seq
655 aa
AA seq
DB search
MKTFEELGVSAEIRRAIEEMGYACPMPVQEEVIPYLLGENNDVVALAQTGTGKTAAFGLP
LIQQINVSKRIPQSLILCPTRELCLQIAGDLNDYSKYINGLRVLPVYGGSSIESQIRALK
QGVHIIVATPGRLLDLMERKTVSLSTIQNVVMDEADEMLNMGFTDSINAILADVPQERNT
LLFSATMSPEIARISKNYLHDAKEITIGRKNESTNNVKHVVFCVHAKDKYAALKRIVDYY
PQIYGIIFCRTRKETQEIADKLMQEGYNADSLHGELSQAQRDAVMQKFRIRNLQLLVATD
VAARGLDVDDLTHVINYGLPDDTESYTHRSGRTGRAGKTGTSIAIINLREKGKMRDIERI
IGKKFEQGEMPTANQICEKQLLKVIDDLEKVKVNDEEIETFMPDIYRKLDWLSKEDLIKR
MVSHEFNKFLDYYRNREDIETATGSERGERNARGRERGERGSSNRQAEPGYKRLFINLGK
MDNFFPNELIGLLNKNTRGRIELGRIDLMPKFSFFEVEEKEAGNVVKALNRANWNGRKVS
VEIAGEESGNTAHGGKRRNDSEGSSRRGAYGKREGDGRKEYGSKKEYGDKKRGYKDDKPA
STPSEKKKPSREERGYTKQRGKKDDWKQFFQDKEGFKDAEPDFSEEGWAKRTKKK
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgaagacatttgaagagctcggtgtgtcggcggagatacgccgtgccattgaagaaatg
ggctacgcatgccctatgccggtacaagaggaagtgattccttatcttttaggagaaaac
aatgacgtagtagcccttgcacagacaggaaccggaaagaccgcagcattcggtctgccg
cttattcagcagattaacgtaagcaaacgaattccacaatccctcatcctctgccccacc
cgcgagctttgcttgcagatagcgggcgacctgaacgactactccaaatacatcaacgga
ttacgggtgctacccgtatatggaggctcctccatcgaaagccagatacgtgccttgaag
caaggcgtacacatcatagtagccactccgggacggctgctcgaccttatggaacgcaaa
accgtctccctttctaccatccaaaacgtggtgatggacgaagcggatgaaatgttgaac
atgggcttcaccgacagcatcaacgccatcctggccgatgtaccgcaagaacgcaacaca
ctgctattttccgccaccatgagcccggaaatagcacgcatctcaaagaattacctgcac
gacgccaaagaaatcaccataggacgcaagaacgaaagcaccaacaatgtgaagcatgtg
gtgttctgcgtacatgccaaagataaatatgccgcactgaagcgtattgtggactactac
ccgcagatatacggcatcatattctgccgcacccgtaaggagacgcaggaaatagccgac
aaactgatgcaggagggatacaacgccgactcgctgcacggcgaactgagccaagcgcaa
cgtgacgccgtgatgcagaaattccgcatccgcaacctgcaactattagtggctacggac
gttgccgcacgcggtctggacgtggatgacctgacacatgtcatcaactacgggctgccc
gatgacacagagagctacacccaccgcagcggacgtacgggacgtgccgggaaaacgggt
acatctatcgccatcatcaacctgcgagaaaaaggaaagatgcgtgatatagaacgcatc
atcggtaagaagttcgagcaaggtgaaatgcccaccgccaaccaaatctgcgagaagcaa
ttactgaaagtgattgatgacctggagaaagtaaaggtgaacgatgaggagatagaaacc
ttcatgcccgacatctaccgcaaactggactggctgagcaaggaagacctcatcaaacgc
atggtttctcacgagttcaacaagttcctggattactaccgcaaccgcgaagatatagaa
accgccacaggcagcgagcgcggcgagcgcaacgcaaggggcagagagcgtggcgaacgt
ggcagcagcaaccgtcaggcagaaccgggctacaaacgcctattcatcaatctcggcaag
atggacaatttcttccccaatgagcttatcggcttgctgaacaagaacacccgcggacgc
atcgaattgggacgcatcgacctgatgcctaaattctctttcttcgaggtagaggaaaaa
gaagccggcaatgtggtgaaagccttgaaccgcgccaactggaacggccgcaaggtatct
gtggagattgccggtgaagaaagcggcaacacagcccacggaggcaaacgccggaacgac
agcgaaggaagcagccgcaggggagcctatggaaaaagagagggcgatggcagaaaagaa
tacggaagcaagaaagaatatggcgacaagaagcgcggctacaaggatgacaagcctgca
tccaccccttccgagaagaagaaacccagccgcgaagaacgcggctacaccaagcaacgc
ggcaagaaggacgactggaagcagttcttccaagacaaagaaggcttcaaggatgccgaa
cccgatttcagtgaggaaggctgggccaaacggacaaagaagaaataa
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