Bacteroides helcogenes: Bache_0663
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Entry
Bache_0663 CDS
T01393
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bhl
Bacteroides helcogenes
Pathway
bhl03030
DNA replication
bhl03410
Base excision repair
bhl03420
Nucleotide excision repair
bhl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bache_0663
03410 Base excision repair
Bache_0663
03420 Nucleotide excision repair
Bache_0663
03440 Homologous recombination
Bache_0663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhl03032
]
Bache_0663
03400 DNA repair and recombination proteins [BR:
bhl03400
]
Bache_0663
Enzymes [BR:
bhl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bache_0663
DNA replication proteins [BR:
bhl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Bache_0663
DNA repair and recombination proteins [BR:
bhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Bache_0663
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bache_0663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
DNA_pol_lambd_f
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
ADV42686
UniProt:
E6SMX0
LinkDB
All DBs
Position
898098..900956
Genome browser
AA seq
952 aa
AA seq
DB search
MNSTDKLFLLDAYALIYRAYYAFIKNPRINSKGFNTSAILGFVNTLEEVLKKENPSHIGV
AFDPSGPTFRHEAYEQYKAQREETPEAIRLSVPIIKDIIRAYRIPILEVPGYEADDVIGT
LATEAGKRGITTYMMTPDKDYGQLVADNVFMYRPKHTGGFEVMGVEEVKAKFDIRSTAQV
IDMLGLMGDASDNIPGCPGVGEKTAQKLIAEFGSIENLLEHTDRLKGALKIKVENNREMI
TFSKFLATIKVDVPITLDMKALVREEANEDELRKIFEELEFRTLLDRVLKKGNSPLPSSS
TPSASPDLYAGTLFAAQPKTNADEKSGPVQGNLFANFADDGADSSKNSNLTRLELLDTDY
QLIDTEKKRKDFIQKLITSEILSIDTETTGTEPMEAELVGMSFSDAENQAYYVPVPPIRE
EALKIVNELRPLYENEKSLKVGQNIKYDMIVLQNYEIQVKGPLFDTMLAHYVLQPELRHN
MDYLAEIYLHYQTIHIDELIGPRGKNQKNMRDLSPEEVYRYACEDADVTLKLKNILEKEL
KEQGGEHLFHEIEMPLVPVLVNIESNGVRLDTEALKQSSEHFTIRLQEIEKEIYALADET
FNIASPKQVGEILFDKLRIVEKAKKTKTGQYVTSEEVLESLRGKHGIIGKILEYRGLKKL
LSTYIDSLPQLINPRTGHIHTSFNQAVTATGRLSSSNPNLQNIPIRDEDGKEIRKAFIPD
DGCEFFSADYSQIELRIMAHLSEDRNMIDAFRSGYDIHAATAAKIYKTDISDVTADMRRK
AKTANFGIIYGISVFGLAERMNVSRQEAKELIDGYFETYPQVKEYMDRSIRIARENGYVE
TIFHRKRFLPDINSRNAVVRGYAERNAINAPIQGSAADIIKVAMAHIHRRFVSNNLKAKM
ILQVHDELNFSVPASEKEIVQKIVIEEMEHAYSMHVPLKADCGWGKNWLEAH
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaaccgataaactctttctgctcgatgcctatgcgctgatatatcgggcctat
tatgcgttcatcaaaaacccgagaatcaattccaaaggattcaatacttcagccatcctg
ggattcgtcaatacacttgaagaagtgctcaaaaaagagaatccttcacacatcggcgtt
gccttcgatccttccggacccacattccgccatgaagcatatgaacaatacaaggcacaa
cgagaggaaacccctgaagccatccgcctgtccgtacccatcataaaggacatcatacgc
gcttaccgcatccccatcctggaagtacccggctatgaggccgacgacgtaataggcact
cttgccaccgaagcaggaaaacgtggtatcaccacttatatgatgacacccgacaaggat
tacggtcaactggtagccgataatgtatttatgtaccgtcccaaacataccggcggtttt
gaagtgatgggcgtggaagaagtaaaagcaaaattcgatatccggtccacggcacaagtc
atcgacatgttaggactgatgggagatgcttccgacaacattcccggctgcccgggtgta
ggagagaaaaccgcacaaaaactgatagccgaattcggaagtattgaaaacttactggaa
cacactgaccgactgaaaggcgctcttaaaataaaagtagagaacaaccgggaaatgata
accttttctaaatttcttgcaaccatcaaagtcgatgtacccatcacactcgatatgaaa
gcgcttgttcgtgaagaagcaaatgaagacgagctacgcaagatttttgaggaattggaa
tttcgcacacttctggatcgggtattgaaaaaagggaattctcccctaccctcctcctca
actccatctgccagccccgacctatatgccggaactttgtttgcagcacaaccgaaaacc
aatgctgatgaaaaaagcggtccggttcaaggcaatttgtttgcaaattttgcggacgac
ggggcagacagctctaaaaattcaaatctgacgcgtttagaattgctggatacagactat
caacttattgatacagagaaaaaaagaaaggattttattcaaaagttaattacatccgaa
attttatcaatagacacggaaaccaccggaacagaaccaatggaggcagaattagtgggt
atgagcttcagtgatgccgaaaaccaggcatattatgtacctgttcctcccattcgtgaa
gaagccttaaaaatagtaaatgagcttcgtccactctacgaaaatgagaaatcactgaaa
gtcgggcaaaatatcaaatatgacatgattgttctccaaaattacgaaatacaagtaaaa
ggacctcttttcgacacaatgcttgctcattacgtacttcagcccgaacttcgtcacaat
atggactacctggcggaaatctatctccattaccaaaccatccacattgatgagcttata
ggtccgcggggaaaaaaccagaaaaacatgcgtgacctttcgcccgaagaagtttaccgt
tatgcctgcgaagacgcagatgtcactctgaaactgaaaaacattctcgaaaaagaactg
aaggaacaaggaggcgaacatttgttccatgaaatagagatgccccttgtcccagtgctt
gtcaatatagagtccaatggagtacgccttgatacggaagcccttaaacaatcatcagaa
cacttcacgattcgcctgcaggaaatagaaaaagaaatctatgcattggcagatgaaacc
ttcaatatcgcttcacccaaacaagtcggtgaaatactttttgacaaactgagaattgta
gaaaaagccaagaaaaccaagaccggacagtacgtcacttccgaagaggtgcttgagagt
ttgcgtggcaaacacgggataatcgggaagatactggaataccgtgggctgaagaaattg
ttgagtacctacatcgactcccttccacaactgatcaacccacgcacaggacatatccac
acctcattcaaccaagcagtcaccgctacgggacgactcagttccagcaatcccaacctg
cagaatattcccatccgtgatgaagatggcaaggaaatacgcaaagctttcattccggat
gacggctgtgaattcttctccgccgactattcgcagatcgaactgcgcatcatggcacac
ctcagcgaagaccggaacatgatagatgcctttcgtagcggatacgacatccatgccgcc
accgccgccaagatatataagacagacatcagcgacgtgacagccgacatgcggcgcaaa
gcgaaaaccgccaacttcggcattatatacgggatttctgtattcggcttggcagaacgc
atgaatgtttcccgtcaggaagccaaagaactgattgacggatactttgaaacctatccg
caagtcaaggaatatatggacagaagcatccggatagcccgtgaaaacggctatgtggaa
accatcttccaccgcaagcgcttcttgccggatatcaactcgcgcaacgctgtggtacgt
ggctatgccgaacgcaatgccatcaacgcacctatacagggaagtgccgccgacatcata
aaagtagccatggcacatatccaccgccgcttcgtaagtaacaatctgaaagcaaagatg
attttacaggtccacgatgagctgaatttcagtgttccggcttcggaaaaggagattgta
caaaaaattgtaatcgaagagatggagcatgcatatagcatgcacgtacccctgaaagcc
gattgtggatggggaaagaactggttggaagcacattaa
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