Bacteroides helcogenes: Bache_0931
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Entry
Bache_0931 CDS
T01393
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bhl
Bacteroides helcogenes
Brite
KEGG Orthology (KO) [BR:
bhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhl03032
]
Bache_0931
03400 DNA repair and recombination proteins [BR:
bhl03400
]
Bache_0931
Enzymes [BR:
bhl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Bache_0931
DNA replication proteins [BR:
bhl03032
]
Prokaryotic type
DNA Topoisomerases
Bache_0931
DNA repair and recombination proteins [BR:
bhl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Bache_0931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
ADV42946
UniProt:
E6SQ41
LinkDB
All DBs
Position
complement(1206969..1209395)
Genome browser
AA seq
808 aa
AA seq
DB search
MQKNLVIVESPAKAKTIEKFLGKDFKVLSSYGHIRDLKKKEFSIDVEKDFEPHYEIPTDK
KKVVAQLKEEAEKAETVWLASDEDREGEAIAWHLYEVLKLKPENTKRIVFHEITKGAILK
AIENPRNIDINLVDAQQARRILDRIVGFELSPVLWKKVKPALSAGRVQSVAVRLIVERER
EIHAFRTEASYRVTAIFLVPDADGKQVEMKAELARRIKTKAEAQKLLESCKSAAFIINDI
TTRPVKRTPAAPFTTSTLQQEAARKLGFTVAQTMMVAQRLYESGNITYMRTDSVNLSEYA
VNSSKEAVMHLMGERYVFPRHFATKTKGAQEAHEAIRPTYMENTKIEGSPQERKLYELIW
KRTIASQMADAELEKTTVNISIGNEADTFTATGEIVKFDGFLRVYRESYDDDSETSEDEA
RLLPPLKKGQKLQYEDITATERFTQHPARYTEASLVRKLEELGIGRPSTYAPTISTIQQR
EYVVKGEKPGEERAYNVLSLQNGQIADTTRTEITGAEKAKLLPTDTGIVVNDFLIEYFPN
ILDFNFTANVEKQFDEIAEGDKQWTAILNTFYKNFHPSVESTLATKSAHKAGERILGTDP
STGKQVSVKIGRFGPVVQIGTAEDEEKPRFAQLNKDMSIETVTLEEALDLFKLPRTLGEY
EDKTVTVGTGRFGPYIQHNRVYVSLPKTADPMTVTLEEAIELIQEKQQAEAQRHIKKFEE
EPELEIMNGRYGPYVAYKGSNYKIPKDIVPQDLSLTACLEIVKLQSEKTPSSKSKRGAKA
ATKTAKATTSKTTVKKTKATATKTAEKK
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaaaccttgtcattgtcgagtcaccggcaaaagcaaaaacgatagaaaaattc
ttgggaaaggattttaaagttctttccagctatggtcatatacgcgatttgaagaagaaa
gaattcagcattgatgttgagaaagactttgaaccgcattatgaaatccccacagataaa
aagaaagtcgtggcccaactgaaagaggaagccgaaaaagctgaaaccgtatggttagct
tccgatgaggaccgtgaaggagaagccattgcatggcatttatatgaagtcctgaaactg
aaaccggagaacaccaagcgcatcgtattccatgaaattactaaaggagccatcctgaaa
gcgattgagaatccccgtaatattgacatcaacttggtcgatgcccagcaggcgcgccgc
attctggatcgcattgtaggctttgaactttcacccgtattgtggaagaaagtaaagcct
gcactttccgcaggccgcgtacaatcggtagccgtccgcctcattgtggaacgcgaacga
gaaatacatgccttccgaacagaagcttcctaccgggtcaccgccatatttctggttccc
gacgcagacggaaaacaagtggagatgaaggcagaattggcacgtcgcatcaagacaaaa
gctgaagcacagaagcttcttgaaagttgtaagtctgccgcattcatcatcaatgatatc
acaacccgcccggtgaaacggactcctgccgccccattcaccacctctaccttacaacag
gaagcggcccgcaaattgggattcaccgtggcacagaccatgatggtggcgcaacgcctg
tacgaatcaggaaacatcacctacatgcgtaccgactccgtcaatctctccgaatatgcc
gtgaacagcagcaaagaggccgtaatgcacctgatgggtgagcgttacgtattcccgcgc
cattttgccaccaagacgaaaggcgcacaagaggcccacgaagccatccgccccacctat
atggagaataccaagatagaaggaagcccccaggaaaggaagttgtacgaactgatctgg
aagcgtactatcgcttcacagatggcagacgctgaactggaaaagaccactgtaaacatc
agcatcggcaatgaagcagacacattcacggccaccggagaaattgtgaagttcgatggt
tttcttcgcgtttaccgcgaatcatacgacgatgattccgagacgtcggaagacgaagcc
cgcctgcttcctcccttaaaaaaaggacagaagttgcagtatgaggacatcactgccact
gagcgtttcacccagcatcccgcccgctacacggaagcaagccttgtgcgcaagctggaa
gaattgggcatcggacggccttctacatacgctcccaccatttccaccattcaacagcgc
gaatatgtagtgaaaggtgagaagccgggcgaagaacgtgcctataatgtattgagcctg
cagaacggacagatagcagacaccacacgcactgaaataaccggggcggaaaaagccaaa
ttactgcctaccgataccggaatagtggtcaatgatttcttgatagaatactttccgaac
atccttgattttaacttcactgccaacgttgaaaagcaattcgatgaaatcgccgaaggc
gacaagcaatggacggccatcctgaatacattctataagaacttccatccatcggtagaa
agcacccttgcaaccaagagcgcccacaaggcaggcgaacgcattctgggtacagatccc
tccacaggcaaacaagtatctgtgaaaatagggcgcttcgggccggtcgtccaaataggt
acggccgaagatgaggaaaaaccgcgctttgcccaattgaataaagatatgtccattgaa
actgtaacattggaagaagctctggacctgttcaaactcccccgtaccctcggtgagtat
gaggataaaacagtcacggtaggaaccggacgtttcggcccctatatccagcacaaccgt
gtatatgtttctttgcccaaaacagcagacccaatgactgttactctggaagaagccata
gaactgatacaagaaaaacagcaagccgaagcccaaagacatatcaagaagtttgaggaa
gagcccgaactggaaatcatgaacggacgttatggcccgtatgttgcttataagggcagc
aattataagattcccaaggatattgttccgcaagatctgagtttgacggcatgtctggag
attgtgaaactgcaaagcgaaaaaacgccaagcagcaaatccaagagaggtgcaaaggca
gcgaccaaaacggccaaggcaacaacatccaaaacgacggtcaagaaaacgaaagctacc
gctaccaagacagccgaaaagaaataa
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