Bacteroides helcogenes: Bache_0949
Help
Entry
Bache_0949 CDS
T01393
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN/SigL
KO
K03092
RNA polymerase sigma-54 factor
Organism
bhl
Bacteroides helcogenes
Pathway
bhl02020
Two-component system
bhl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bhl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Bache_0949
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Bache_0949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhl03021
]
Bache_0949
Transcription machinery [BR:
bhl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Bache_0949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
DUF7090
LacI
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ADV42964
UniProt:
E6SQJ0
LinkDB
All DBs
Position
complement(1232583..1234073)
Genome browser
AA seq
496 aa
AA seq
DB search
MAQGSRQVQTQAQQQIQTLSPQQILVVKLLELPAVELEDRVHAELLENPALEEGKEESAN
DEYTDAPDAETAAEDGGNTDYDSLSDYLTEDDIPDYKLQENNRSKGEQAEEIPFSDTTSF
YETLREQLGERDLTEHQRELAEYLIGSLDDDGLLRKSLDSVSDELAIYAGIEATPQELEE
ALKIIQDFDPAGLGARDLQECLLIQIRRKIEQQHFTPNPLLYIEEAIISECYEEFTRKHW
DKIQQKLDLEEDAFEQAIKEICKLNPRPGASLGEAIGKNMQQIVPDFIVDTYDDSTINVT
LNNRNVPELRMSRDFTEMVEEHTKNRANQSKESKEAMMFLKQKMDAAQGFIDAIKQRQNT
LMTTMQAIIDLQRPFFLEGDESLLRPMILKDVAERTGLDISTISRVSNSKYVQTNYGIYP
LKFFFSDGYTTEDGEEMSVREIRRILKECIDNEDKKKPYTDDELTEILKEKGYPIARRTV
AKYRQQMNIPVARLRK
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaggttcccgacaggtacagacgcaggcgcaacagcagattcagacgttgtct
ccgcaacagattctggtagtaaagctattagaacttcccgctgtggagctggaagaccgt
gtgcatgccgaacttctggagaatccggcattggaagagggaaaagaagaatcggccaac
gatgaatacaccgatgctcccgatgctgaaaccgccgcagaagatggtggaaacaccgat
tatgattctttaagcgactacctgacagaagatgacattcccgactataaattacaggag
aacaaccgaagcaaaggcgagcaagccgaagaaattcctttctccgacaccacttccttt
tacgaaactttgagagagcaattaggtgagcgtgatctcaccgaacatcaacgtgaattg
gcggagtacctcatcggttcactggacgatgacggcctgctgcgcaaatcattggacagc
gtcagcgatgaacttgccatttacgccggaatcgaagctacccctcaggaattggaagaa
gcattgaaaattatccaagactttgatccggccggattgggggcccgcgacctccaagaa
tgccttcttatccaaatccggcgcaagatagagcagcaacatttcactccgaatccgttg
ctttatattgaagaagctatcatttctgaatgttatgaagaattcacccgcaaacattgg
gacaagattcagcagaagctcgatttggaagaagatgcttttgaacaggccatcaaagaa
atatgcaagctgaatccccgtccgggagcatcattgggtgaagccatcggcaaaaatatg
cagcagatagtacctgacttcattgtagatacttatgatgacagtaccatcaacgtaacg
ctgaacaaccggaacgttcctgaactgcgtatgagccgggatttcacggaaatggtggag
gaacatactaagaacagggcaaaccagtccaaagaatccaaagaagccatgatgtttctg
aaacagaaaatggatgcggcccaaggattcatcgacgccataaaacagcgccagaatacg
ctgatgaccaccatgcaagccatcatcgatctgcaacgtccgttcttcctcgaaggggac
gaatcgctgcttcgccccatgattctgaaggacgttgccgaacggacgggattggacata
tccaccatctcacgtgtgagcaacagcaaatatgtgcagaccaactatggcatctacccg
ttgaaattcttcttcagtgatggctacaccaccgaagacggtgaagaaatgtccgtacgc
gaaatccgcagaatattgaaagaatgcattgataatgaggataagaaaaagccctatacc
gacgatgaactcaccgaaatactaaaagaaaaaggatatccgatagcccgccgcacggta
gctaaataccggcaacagatgaatatccctgtcgcaagactcagaaagtga
DBGET
integrated database retrieval system
