Bacteroides helcogenes: Bache_0983
Help
Entry
Bache_0983 CDS
T01393
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bhl
Bacteroides helcogenes
Pathway
bhl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bache_0983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhl03019
]
Bache_0983
03016 Transfer RNA biogenesis [BR:
bhl03016
]
Bache_0983
Enzymes [BR:
bhl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Bache_0983
Messenger RNA biogenesis [BR:
bhl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Bache_0983
Transfer RNA biogenesis [BR:
bhl03016
]
Prokaryotic type
tRNA degradation factors
Bache_0983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
RNase_II_C_S1
DUF6858
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
ADV42997
UniProt:
E6SQM3
LinkDB
All DBs
Position
complement(1268573..1270780)
Genome browser
AA seq
735 aa
AA seq
DB search
MINPIVKTIELPDGRTITLETGKLAKQADGSVMLRMGNTMLLATVCAAKDAVPGTDFMPL
QVEYKEKFSAFGRFPGGFTKREGRASDYEILTCRLVDRALRPLFPDNYHAEVYVNIILFS
ADGVDMPDALAGLAASAALAVSDIPFNGPISEVRVARIDNQFVINPTFEQLEKADMDLMV
GATYENIMMVEGEMSEVSEQDLLEAMKAAHEAIKIQCKAQMELAEEVGSTVKREYCHEVN
DEELRKAVHDACYAKAYAIAASGNKNKHERMDAFDAICEEFKAQFSEEELAEKAALIDRY
YHDVEKEAMRRSILDEGKRLDGRKTTEIRPIWCETSYLPGPHGSAIFTRGETQSLSTVTL
GTKLDEKIIDDVLEHGKERFLLHYNFPPFSTGEAKAQRGVGRREIGHGHLAWRALKGQIP
ADYPYVVRVVSDILESNGSSSMATVCAGTLALMDAGVKIKKPVSGIAMGLIKNAGEAKYA
VLSDILGDEDHLGDMDFKVTGTKDGITATQMDIKCDGLTYDILEKALLQAKEGREFILGK
ITECIAEPREDLKPHAPRIETMTIPKEFIGAIIGPGGKIIQGMQEETGATITIEEIDNVG
RIEIAGTNKQCIDDAMRMIKGIVAVPEVGEVYKGKVRSIMPYGAFVEFLPGKDGLLHISE
IDWKRLETVEEAGIKEGDEIEVKLLEVDPKTGKFKLSRKVLLPKPEGYVERPERGERRDR
NDRGGERRERRDRND
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgattaatccaattgttaagacgatcgagcttcccgatggcagaaccatcacgctcgaa
acgggaaagctggcaaaacaggcagacggttctgtaatgcttcgtatgggcaacaccatg
cttcttgctactgtttgtgccgccaaggacgcagttcccggaacagatttcatgccgtta
caggtagagtacaaagaaaaattctccgcattcggacgttttcccggaggttttacaaag
cgtgaaggacgcgcttctgattacgaaatcctcacttgccgcctcgttgaccgtgctctc
cgccctctattccccgacaattaccacgcagaagtatatgtaaatatcatcctcttctcg
gcagacggcgttgacatgcccgatgcattggcaggacttgcagcttccgccgcacttgcc
gtttcagatatcccgttcaacggccccatctccgaagtacgtgttgcacgtatcgacaac
cagttcgtcatcaacccgactttcgagcaattggaaaaagccgacatggatctcatggta
ggcgctacctatgagaatatcatgatggtggaaggcgaaatgagcgaggtttcagagcag
gacttgctggaagccatgaaggccgcccacgaagctatcaagattcagtgcaaagctcag
atggaactggctgaagaagttggctccaccgtcaaacgtgaatattgccatgaagtcaat
gacgaagaactccgcaaggctgttcacgatgcttgttacgcaaaagcatatgctattgcc
gcttccggcaacaagaataagcacgaacgcatggatgcattcgatgctatctgtgaagaa
ttcaaagctcagttctctgaagaggaattggcagagaaagcagcacttatcgaccgctac
taccacgatgtagaaaaagaagcaatgcgccgttccattcttgatgaaggcaagcgtctg
gacggacgcaagactaccgaaatccgtcctatctggtgtgaaaccagctacctgcccgga
cctcacggttctgcaatcttcacacgtggtgagacacaatcgttatccaccgttactttg
ggaacaaaattagacgaaaagattatcgacgatgtactggaacatggaaaagaacgtttc
ctgctgcactacaactttcctccattctctacaggtgaagccaaagcccaacgaggtgta
ggccgtcgtgaaatcgggcacgggcatctggcatggcgtgctttgaaaggacaaatccct
gccgactatccatacgtagtacgtgtggtttccgacattctcgaatcaaacggttcctct
tcaatggctaccgtatgtgccgggacgctggcattaatggatgccggcgtaaaaatcaag
aagccggtatcgggcattgcaatgggacttatcaaaaatgcaggcgaagcaaaatatgcc
gtactgtctgacatcctcggcgatgaagaccatttgggtgacatggacttcaaggtaact
gggacgaaagacggcatcactgccactcagatggatatcaagtgtgacggactgacttat
gacattctggaaaaagctttgctgcaagccaaagaggggcgcgaatttattctcggtaaa
atcacagaatgcattgcagaaccccgtgaagacctgaagccacatgctccgcgtatcgaa
acgatgactatccccaaagaatttatcggagccatcattggccccggcggaaagatcatc
cagggtatgcaagaagaaaccggtgctaccatcactatcgaggaaatagacaatgtgggt
agaattgagattgccggaacaaacaagcaatgtattgatgacgcaatgcgcatgatcaaa
ggcatcgtagccgtacccgaagtaggtgaagtctataaaggtaaagtgcggagcatcatg
ccttacggtgcatttgttgaattcttgcccggcaaagacggcttgctgcacatctccgag
attgactggaaacgtctggaaacagtagaagaagccggaatcaaagaaggtgatgaaata
gaagtgaaactgttggaggttgacccgaaaaccggcaagttcaaactgtctcgtaaagta
ttgcttccgaaacccgaaggctatgttgaacgtcccgaaagaggcgagcgccgcgacaga
aacgacagaggaggtgaacgccgcgaacgtcgagacagaaacgactaa
DBGET
integrated database retrieval system
