Bacteroides helcogenes: Bache_1019
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Entry
Bache_1019 CDS
T01393
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bhl
Bacteroides helcogenes
Pathway
bhl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bache_1019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhl03019
]
Bache_1019
03400 DNA repair and recombination proteins [BR:
bhl03400
]
Bache_1019
Enzymes [BR:
bhl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bache_1019
Messenger RNA biogenesis [BR:
bhl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bache_1019
DNA repair and recombination proteins [BR:
bhl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Bache_1019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
NAT10_TcmA_helicase
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ADV43030
UniProt:
E6SR86
LinkDB
All DBs
Position
1314310..1316745
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AA seq
811 aa
AA seq
DB search
MTEMQEEGTLRLPELKERRLPETCREAVSVLLKEVYGYDRFRDFEIYDDLFKGKEKLCIS
QGQLIEHVILEAEKARKSEAQVDNILLTAPTGSGKSLLFQLPAIYLGKEYGLLTIVVSPL
KALIVDQVESLLDLGYTRVAYASSDLSPEQKSDVYRRVREGEIDLFYLSPELLLSYDIRH
FVGERRIGMVVIDEAHTVTTWGKEFRVDYWFLGRYLSELKQNLGYAFPLFALTATAVWNP
KGGNDMIFETIRSLQMEPCVLYVGTVKRRNIGFDIRQMQIEAGETYDRAKQRVVLARTED
FLDGHKTLLYYPFAGGIEMRLKTWVKSTDWHYVATYYGKKDKVQKAAIVQEFKEGEKKLI
IATKAFGMGVDISDIDRVYHAAPSSTFVDYIQEIGRAARDGSIQGVASTDFNERDFYYMK
RLHQTGNIAQEQLVLILRKLADVYRMKGGRQEMLVSLSDFEFVVKLPRTKNKLEYEAELG
QLIKTALLWLEDDLAKRFGKHLIEVSPKNLLTEGYIQDKTGDAFAREFADYLTPIAGEEG
LYKAHLEDIWEKRFSELGYKEFKQKLNNGTLMEGARAVSVGKHEVLLKEDASVIRQRMDA
LFKDLGIMLKTALIKSKGKFDEDGLRLLFADHNMDVRSAKRFIGSLLESRTEEGRSVSYI
SSAKKKDSNELSFTVTRGFDLLLSRYQKLFAQRIVGNAGDRLTYFCTPFSDLNMLLNLLS
MLGGLSFSVEGGGTPCVLVCFNEPDLLLQLASSGDYRNQILDDNERIFEEQIELFTSFFG
NDSLTDGQRWDFVEDYFTGMGVEELKKKYEG
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaatgcaggaagaaggtacattgcggttaccggagttgaaagaacggcgcttg
ccggagacttgtcgtgaggctgtaagcgtactcttaaaagaggtttacggttatgaccgg
ttccgtgactttgagatttatgatgatttgtttaaggggaaagagaagctttgtatttct
caggggcaactgatagagcatgttatccttgaggcggagaaggcacggaaaagtgaggca
caggtggacaatatcctcttgacagcgcctaccggttcgggaaaatctctgctgttccag
cttcctgccatttatctgggaaaagagtacgggcttctcactatcgtggtttctcctttg
aaagcactgatagtagatcaggtggagagcctgctggatttgggctatacgcgcgtggca
tatgcatcctccgacctctcgcctgaacaaaagtcggacgtttaccgccgcgtgcgtgaa
ggggaaatcgacttgttctacctttcaccggagttgcttctctcctatgacatcaggcac
tttgtgggtgaacgccgcatcgggatggtggttatcgacgaagcacatacggtcactacg
tggggcaaggaattccgtgtggactattggttcttgggaagatatctcagcgagttgaag
cagaaccttggttatgccttccccttgtttgcgctgacagctacggctgtgtggaatcct
aaggggggcaacgacatgatattcgagacaatacgttctttgcagatggagccttgtgtg
ctctatgtgggtacggtgaagcgccggaacatcggctttgacatccggcagatgcagata
gaggcgggagaaacttacgacagagccaagcagcgcgtggtgctggcccgtacggaagac
tttctggacggacacaagacattgctctactatccttttgccggaggcatcgagatgcgt
ctcaaaacttgggtaaagtccactgactggcactatgtggccacttattacggcaaaaag
gacaaggtgcagaaagcagccattgtgcaggagttcaaggagggagagaagaagctgatc
atcgctaccaaggctttcggcatgggtgtggacatcagtgatatagaccgtgtgtatcat
gcggccccctcaagcacatttgtcgattatattcaggaaatagggcgtgcggcacgcgat
ggcagcattcaaggagtggcatctaccgacttcaacgaacgcgatttctactacatgaag
cgtctgcaccagactgggaacatcgcccaggaacaactggtactcattcttagaaaactg
gccgatgtatatcggatgaagggcggcaggcaggagatgctggtatcactctccgacttt
gaatttgtggtgaagctgccccgtaccaagaataagcttgaatatgaggcagagttggga
cagctcatcaagacggctctcttgtggctcgaagacgatttggcaaaacgctttggcaag
cacttgatagaagtcagccccaagaatctgttgaccgaagggtacattcaggacaagacg
ggcgatgcctttgcccgcgagtttgccgattacctgacgccgatagcaggagaggaagga
ctttataaagcgcatctggaagacatctgggagaagcgtttctccgaactgggctataag
gagttcaagcagaaattgaacaacgggactttgatggaaggggcccgtgcagtgtcggtg
ggaaagcatgaagtgctgctgaaagaagacgcttctgtgatccgtcagcgcatggatgct
ttgttcaaggacttgggcataatgctgaagacggccctgataaagtcgaaaggaaaattt
gatgaagacggattgcgcctcctctttgccgatcacaacatggatgtacgttctgccaag
cgctttatcggatctctgctcgaaagccgtacggaggaaggccgcagcgtgagctacatc
agcagcgcaaagaagaaagactcgaacgagctttctttcacggtgaccagaggattcgac
ctgctcttgtcccgttatcagaagctgttcgcacagcgcatagtaggcaatgccggtgac
cgcctcacctacttctgcactcctttttccgacctgaacatgctgctcaacctgctttcc
atgctcggaggattgtcgttcagcgtagaagggggaggcacgccctgcgtccttgtttgc
ttcaacgaacctgaccttttgctgcaactggcttcttcgggcgattaccgcaatcagatt
ctcgatgacaacgagcgtatttttgaggagcagatagaactcttcacttccttcttcggc
aacgacagcctgaccgacgggcaacgttgggactttgtggaagattatttcacgggtatg
ggtgtggaagaactgaagaagaagtacgaggggtga
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