Bacteroides helcogenes: Bache_1162
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Entry
Bache_1162 CDS
T01393
Name
(GenBank) DNA replication and repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
bhl
Bacteroides helcogenes
Brite
KEGG Orthology (KO) [BR:
bhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhl03400
]
Bache_1162
DNA repair and recombination proteins [BR:
bhl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Bache_1162
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
ChlI
Zn_ribbon_LapB
Lon_C
DnaB_C
AAA_22
AAA_16
nSTAND3
AAA_24
AAA_14
AAA
NTPase_1
AAA_29
Elong_Iki1
DUF7129
zf-RING_10
HypA
RecA
CobU
Nitro_FeMo-Co
DZR
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
ADV43172
UniProt:
E6SSQ9
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All DBs
Position
complement(1478503..1479870)
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AA seq
455 aa
AA seq
DB search
MAKEKTVYVCSNCGQESPKWVGKCPSCGEWNTYVEEVIRKETVNKRPVSGIETTKARPVT
LNEIAAGDEPRIDLHDTELNRVLGGGLVQGSLVLIGGEPGIGKSTLVLQTVLQMPEKRIL
YISGEESARQLKLRADRLTNTPGDCLIVCETSLEQIYVHIKNTRPDLVIIDSIQTISTET
LESSPGSIAQIRECSASILRFAKETHTAVILIGHINKEGSIAGPKVLEHIVDTVLQFEGD
QHYMYRILRSIKNRFGSTAELGIYEMRQDGLRQVNNPSELLLSQDHEGMSGIAIASAIEG
VRPFLIETQALVSSAVYGNPQRSATGFDIRRMNMLLAVLEKRVGFKLAQKDVFLNIAGGL
KVNDPAIDLAVISAILSSNMDTAIEPEVCMAGEIGLSGEIRPVNRIEQRIGEAEKLGFKR
FILPKYNMQGLNAKKTRIELIPVRKVEEAFRTLFG
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaaaaactgtttatgtgtgcagtaactgcggacaagaatctcccaaatgg
gtaggcaaatgcccgtcgtgcggagaatggaatacatacgtggaagaagtgatacggaaa
gaaaccgtaaacaagcgtcccgtctccggcatagaaacgactaaagccagaccggttacc
ctgaatgagatagcagccggtgacgaaccgcgcatcgatctccatgataccgaactgaac
agggtgttgggaggaggactggtacaaggctctctcgtattgatagggggcgaaccgggc
ataggtaaatcgaccctggtattgcagactgtattgcagatgccggaaaagcggatactc
tatatctcaggtgaagaaagtgcacgccaactgaaactgcgcgccgaccggttgacaaat
acacccggtgactgtctcatcgtctgtgaaacttctctggaacaaatctatgtacacata
aaaaacacacgtccggatcttgtaatcatagactccatacagactatctcaaccgaaaca
ctcgaatcttcccctggaagcatcgcccagatacgagagtgctccgcctccatactgcgc
tttgcaaaagaaacacacacagccgtcattctgataggacacatcaacaaggaaggcagc
atagccggcccgaaagttctggaacacattgtggacaccgtactccagttcgaaggagat
caacattatatgtaccgcatactccgcagcatcaagaaccgttttggcagtacggcggaa
ttgggcatctacgaaatgcgccaggacggactacggcaagtaaacaatccctcggaatta
cttttgagtcaagaccacgagggcatgagtggaatagccatcgcttcggccatagaaggc
gtcagacctttcctcatcgaaacacaggcattggtgagcagcgccgtgtatggcaatccg
caacgctctgccacaggatttgacatccggcgcatgaatatgctgctggccgtactggaa
aaacgggtcggcttcaaactggcgcaaaaagacgtatttctcaatatagccggaggtctg
aaagtgaatgaccccgccatagacctcgctgtaatcagcgccatcctgtccagcaacatg
gacactgccatagaaccggaagtctgcatggcaggtgaaatcggcctgtcaggagaaata
cgcccggtaaaccgcattgagcagcgcatcggggaagcggagaaacttggattcaaacgc
ttcatattgcccaagtacaacatgcaagggctcaatgcaaaaaagacaagaatagaatta
atacccgtacggaaagtggaagaagcattccgtacattattcggatag
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