Bacteroides helcogenes: Bache_1722
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Entry
Bache_1722 CDS
T01393
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bhl
Bacteroides helcogenes
Pathway
bhl02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bhl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Bache_1722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhl03021
]
Bache_1722
Transcription machinery [BR:
bhl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Bache_1722
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_11
GerE
HTH_24
HTH_38
Motif
Other DBs
NCBI-ProteinID:
ADV43720
UniProt:
E6SN51
LinkDB
All DBs
Position
2159212..2159763
Genome browser
AA seq
183 aa
AA seq
DB search
MENNAKQIELKFSRFFTVNFPKVKNFAQMLLKSESDAEDVAQDVFCKLWMQPELWLDNDK
ELDNYIFIMTRNIVLNIFKHRQVEQEYQTEIKKTFLYELTEKEEILNSVYYKEMLLIIQL
TLEKMPKRRRLIFELSRFRGLSHKEIADKLDVSIRTIEHQVYLALIELKKVFLFFVFFSN
IFK
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataacgccaagcagattgaattaaagttttcgaggttttttactgtgaatttt
cctaaagtaaagaactttgctcaaatgctgcttaaatctgaaagtgatgcagaagatgtg
gctcaagatgttttctgtaagctttggatgcagccggaattatggctggataatgataaa
gaactagacaattacattttcataatgactagaaatatagttctgaacatctttaaacat
cgacaggtagaacaagaatatcagacggagattaaaaaaacttttctttatgaactgaca
gaaaaggaagagatcttgaatagtgtatattataaggagatgctattgattattcagttg
acactggagaagatgccgaagcgtcgtcggttgatattcgaacttagtcgttttcgagga
ttaagccataaagaaatagctgataaactcgatgtttctatccgaacaatagagcatcaa
gtttatttggcattgatcgaattaaagaaggtattcctcttttttgtttttttctctaat
atttttaagtag
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integrated database retrieval system
