Bacteroides helcogenes: Bache_1889
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Entry
Bache_1889 CDS
T01393
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bhl
Bacteroides helcogenes
Pathway
bhl03030
DNA replication
bhl03430
Mismatch repair
bhl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bache_1889
03430 Mismatch repair
Bache_1889
03440 Homologous recombination
Bache_1889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhl03032
]
Bache_1889
03400 DNA repair and recombination proteins [BR:
bhl03400
]
Bache_1889
Enzymes [BR:
bhl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bache_1889
DNA replication proteins [BR:
bhl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bache_1889
DNA repair and recombination proteins [BR:
bhl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bache_1889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
DUF2095
Motif
Other DBs
NCBI-ProteinID:
ADV43867
UniProt:
E6SPM6
LinkDB
All DBs
Position
2335591..2336361
Genome browser
AA seq
256 aa
AA seq
DB search
MKLNLKNPIVFFDLETTGTNINSDRIVEICYLKVYPNGNEEAKTMRINPEMHIPAEASAV
HGIYDEDVAKCPTFKEVARNIANDIEGSDLAGFNSNRFDIPVLAEEFLRAGVDIDMSRRK
FVDVQVIFHKMEQRTLSAAYKFYCGKNLEDAHTAEADTRATYEVLMAQLDRYEDLQNDVA
FLADYSSFNKNVDFAGRMVYDEHGVEIFNFGKYKGMSVSEVLKRDPGYYSWILNSDFTLN
TKAMLTKIRLREMTQK
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaaatttgaaaaatccgattgttttcttcgatttggagacaaccggtacaaat
atcaattcggatagaattgtcgaaatctgttatttgaaggtttatcctaacggaaatgaa
gaagcgaaaacaatgcgtatcaatcctgaaatgcatattcctgccgaggcttcggctgtt
cacggcatttacgatgaagatgtggcaaaatgccctacttttaaggaggttgctcgtaac
atagccaatgatattgaaggaagtgatcttgctggctttaactccaaccgttttgatata
cctgttctggcggaagaattcctgcgcgctggagtggatattgatatgagtcgtcgtaaa
ttcgtggatgtacaagttatttttcacaagatggaacagcgtactttgtccgcagcttat
aaattctattgcggtaagaatctggaagatgcacatacagccgaggctgacacccgtgct
acgtacgaggtgctgatggctcagttggatcgttatgaagatttgcagaatgatgtcgct
tttcttgccgattattccagcttcaacaaaaatgtggactttgcagggcgcatggtttat
gatgagcatggagtggagatttttaatttcggcaagtataaaggcatgtctgtctcggaa
gtgctgaagcgtgatccgggttattatagctggattttgaacagtgattttaccttgaat
accaaggctatgctgacaaagatacgcctgcgtgaaatgactcagaaatag
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