Bacteroides helcogenes: Bache_2565
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Entry
Bache_2565 CDS
T01393
Name
(GenBank) Exodeoxyribonuclease I subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
bhl
Bacteroides helcogenes
Brite
KEGG Orthology (KO) [BR:
bhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhl03400
]
Bache_2565
DNA repair and recombination proteins [BR:
bhl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Bache_2565
Archaeal homologous recombinant proteins
Bache_2565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
ADV44523
UniProt:
E6SVT4
LinkDB
All DBs
Position
3090968..3092185
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AA seq
405 aa
AA seq
DB search
MKILHTSDWHLGHTLYNYDRTPEQQAFLKQLARIVQQEKPDVMVVCGDVYHYSVPSAATQ
RMYTEGMLKIHEACPEMTIVVTAGNHDSSSKLEIDSSLWQHFGVKVIGNIERNREEVNLD
RHIIEIKDGKGKKQGYIIAVPHVYPQNFPTLDTDTPREERQARFFQALLDKAKKLNTEGL
PIVLMAHLAVEGSDRTGHDESNIGGMETVSLHDMGKGYDYLALGHIHCPQDIKGSGHRAR
YCGTPLPVSFDETYPHSVSIVELNRNEEPQTRTAGIENPMPLVTLPHEPMPFEEALRLLE
EYPADKQAYIRLNVLADNYQAPDCMERAANAVKDKACKFCCIKSNRERQAGGSSPGHLSI
QEIQEKSPLDIAKLYYRETEGEEMDEELCGLMNDILRQVKEKEKQ
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaagatattgcataccagcgactggcatctgggacatactttatataattatgaccgc
accccggaacaacaggcttttctgaaacaactcgcccgtatcgtgcaacaggagaagccc
gatgtcatggtggtatgcggagatgtttaccactactccgtcccttccgccgccacgcaa
aggatgtacacggaaggcatgctgaagatacatgaagcatgtcctgaaatgaccattgta
gtaaccgccggcaaccacgacagcagttccaaactggaaatagacagcagcctgtggcaa
catttcggagtaaaagtcatcggaaacatcgaacggaaccgggaggaagtaaacctggac
aggcatatcatcgaaataaaagacgggaaagggaaaaaacagggatatatcatcgctgtg
ccccatgtatatccgcaaaactttccgacgcttgacactgacactccgagagaagaacgc
caggcccgtttcttccaggccttgctggataaagcgaagaagctgaacaccgaagggctg
cccattgtgctgatggctcatttggcagtcgaaggcagtgaccggacgggacatgatgaa
agcaatataggaggaatggaaaccgtaagcctgcacgatatgggaaaaggctatgactat
ctggcactggggcacattcattgtccgcaggacatcaagggaagcggtcaccgtgcacgc
tattgcggtactcccctgcccgtaagctttgacgaaacttacccgcactctgtctccatt
gtcgaactgaacagaaacgaagaaccgcagacaagaactgccggcatagagaatccgatg
cctctggtgacgctgccccatgagccgatgccatttgaagaagcattacgcctgttagaa
gaatatcctgcggacaagcaagcatacatccggctgaatgtattggcggacaactatcag
gcgcccgactgcatggagcgtgccgccaacgccgtaaaagataaagcctgcaagttctgc
tgcattaagtccaaccgtgaaaggcaagccggaggaagttctcccggacacctatccatt
caggagattcaggaaaagtctccgctggatatagccaagctctattaccgtgaaacggaa
ggagaagaaatggacgaggaactttgcggcctgatgaacgacatactccggcaagtgaaa
gagaaggaaaaacagtga
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