Bacteroides helcogenes: Bache_2950
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Entry
Bache_2950 CDS
T01393
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
bhl
Bacteroides helcogenes
Brite
KEGG Orthology (KO) [BR:
bhl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhl03019
]
Bache_2950
03009 Ribosome biogenesis [BR:
bhl03009
]
Bache_2950
Messenger RNA biogenesis [BR:
bhl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Bache_2950
Ribosome biogenesis [BR:
bhl03009
]
Prokaryotic type
rRNA processing factors
Bache_2950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
DUF6305
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
ADV44885
UniProt:
E6SPC8
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All DBs
Position
3509273..3510847
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AA seq
524 aa
AA seq
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MTSELVVDVQPKEVSIALLEDKQLVELQSEGRSLYFSVGNMYLGRIKKLMPGLNACFVDV
GYEKDAFLHYLDLGPQFNSLEKYVKQTLSDKKKLNPITKATILPDLEKDGTVSNTLKVGQ
EVVVQIVKEPISTKGPRLTSELSFAGRYLVLIPFNDKVSVSQKIKSSEERARLKQLLMSI
KPKNFGVIVRTVAEGKRVAELDGELKVLLKHWEDAITKVQKATKFPTLIYEETSRAVGLL
RDLFNPSFESIHVNDEAVYHEIKDYVTLIAPERADIVKLYKGQLPIYDNFGITKQIKSSF
GKTISYKSGAYLIIEHTEALHVVDVNSGNRTKNANGQEGNALEVNLGAADELARQLRLRD
MGGIIVVDFIDMNEAENRQKLYERMCQNMQKDRARHNILPLSKFGLMQITRQRVRPAMDV
NTTETCPTCFGKGTIKSSILFTDTLESKIDYLVNKLKIKKFSLHIHPYIAAYINQGIVSL
KRKWQMKYGFGIKIIPSQKLAFLEYVFYDPHGEEIDMKEEIEIK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
gtgacaagcgaactcgttgttgacgtacagcccaaagaggtttccatcgcactgcttgag
gacaagcagcttgtggaactgcaaagtgaaggcagaagcctgtacttttctgtgggcaac
atgtatttgggacgcatcaagaagttgatgccgggcctgaatgcctgcttcgtggacgtg
ggttacgagaaagatgcttttcttcattatctggacttaggtcctcaattcaactcttta
gagaagtacgtaaagcaaactttaagcgataaaaaaaagctaaatcctattacaaaagca
accatacttcccgatcttgaaaaagacggaactgtttccaacactctcaaggtaggacaa
gaagtagtggtgcaaattgttaaggaacctatctctaccaaagggccacgactgacttcc
gaactctcttttgccggaagatatcttgtgcttatcccctttaacgacaaggtttccgta
tcacaaaaaattaagtcaagcgaagaacgtgcccgcctcaagcaactgctgatgagcatc
aagccgaaaaatttcggagtgattgtacgcacagtggccgaaggcaaacgcgtagccgaa
cttgatggagagcttaaagtattactgaagcattgggaagatgccattaccaaagtacag
aaagccactaagtttccgacactgatttacgaagagaccagccgcgccgtaggattgcta
cgcgacctgttcaatccttcgtttgaaagcatccacgtcaacgacgaagcggtgtatcac
gaaatcaaggactacgtaacgcttatcgctcccgaacgggcagatatcgtgaagctgtac
aagggccaacttcccatttacgacaatttcggtatcaccaaacagattaaatcatcattt
ggcaaaaccatttcatacaaaagtggcgcttacctgattattgagcatactgaagcgctt
cacgtagttgacgtgaacagcggtaaccgcaccaagaatgccaacggacaggaaggcaac
gcactggaagtgaacttaggagcagccgatgaactggcacgccagctacgactgagagat
atgggtggtatcattgtggtggacttcatagacatgaacgaagccgaaaatcgtcagaaa
ctttacgaacgtatgtgccaaaacatgcaaaaggacagggcacgccacaacatccttcca
ctcagcaaattcgggctgatgcagatcacacgtcagcgtgtgcgaccggctatggatgtc
aacaccacggaaacctgccctacctgcttcggtaaaggtactatcaaatcgtccatcctc
tttacggacactttagagagtaaaattgactatctggtcaacaaattgaagattaagaaa
ttctcgttacacatccacccgtacattgcggcctatatcaatcagggaattgtatccctg
aaacgaaaatggcaaatgaagtacggattcggaatcaagattattccaagccagaagctc
gcgtttctggagtatgtattctacgacccgcatggggaggagatagacatgaaggaagaa
atcgaaatcaaataa
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